STRINGSTRING
LSM3 LSM3 A0A2I2FPC6 A0A2I2FPC6 A0A2I2FNG7 A0A2I2FNG7 A0A2I2FMZ1 A0A2I2FMZ1 A0A2I2FMH3 A0A2I2FMH3 A0A2I2FLL0 A0A2I2FLL0 A0A2I2FKZ8 A0A2I2FKZ8 A0A2I2FK78 A0A2I2FK78 A0A2I2FK34 A0A2I2FK34 A0A2I2FK30 A0A2I2FK30 A0A2I2FH82 A0A2I2FH82 A0A2I2FH75 A0A2I2FH75 A0A2I2FG79 A0A2I2FG79 A0A2I2FG64 A0A2I2FG64 LSM4 LSM4 A0A2I2FFK0 A0A2I2FFK0 A0A2I2FF86 A0A2I2FF86 A0A2I2FD50 A0A2I2FD50 A0A2I2FC74 A0A2I2FC74 A0A2I2FBT8 A0A2I2FBT8 A0A2I2FBK7 A0A2I2FBK7 A0A2I2FB00 A0A2I2FB00 A0A2I2FAZ5 A0A2I2FAZ5 A0A2I2FAW4 A0A2I2FAW4 A0A2I2FAL5 A0A2I2FAL5 A0A2I2F980 A0A2I2F980 A0A2I2F923 A0A2I2F923 A0A2I2F8S5 A0A2I2F8S5 A0A2I2F841 A0A2I2F841 LSM5 LSM5 A0A2I2F6R9 A0A2I2F6R9 A0A2I2F6I4 A0A2I2F6I4 A0A2I2F6B9 A0A2I2F6B9 A0A2I2F5V4 A0A2I2F5V4 A0A2I2F5M7 A0A2I2F5M7 A0A2I2F4N4 A0A2I2F4N4 A0A2I2F4M2 A0A2I2F4M2 A0A2I2F4H0 A0A2I2F4H0 LSM8 LSM8 A0A2I2F1Z9 A0A2I2F1Z9 A0A2I2F1I7 A0A2I2F1I7 A0A2I2F1C2 A0A2I2F1C2 A0A2I2F172 A0A2I2F172 A0A2I2F0J3 A0A2I2F0J3 A0A2I2F0J1 A0A2I2F0J1 A0A2I2F098 A0A2I2F098 A0A2I2F082 A0A2I2F082 A0A2I2F032 A0A2I2F032 A0A2I2EZH2 A0A2I2EZH2 A0A2I2EYR8 A0A2I2EYR8 A0A2I2EYA9 A0A2I2EYA9 A0A2I2EY52 A0A2I2EY52
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
A0A2I2FPC6Matrin-type domain-containing protein. (238 aa)
A0A2I2FNG7U2-associated snRNP A. (260 aa)
A0A2I2FMZ1Splicing factor subunit; Belongs to the SF3B5 family. (84 aa)
A0A2I2FMH3Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (93 aa)
A0A2I2FLL0Lin1 family protein. (449 aa)
A0A2I2FKZ8Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family. (123 aa)
A0A2I2FK78Pre-mRNA-splicing factor rse1. (1209 aa)
A0A2I2FK34RRM domain-containing protein. (307 aa)
A0A2I2FK30Putative pre-mRNA splicing factor. (1263 aa)
A0A2I2FH82Nop domain-containing protein. (522 aa)
A0A2I2FH75Uncharacterized protein. (793 aa)
A0A2I2FG79Uncharacterized protein. (572 aa)
A0A2I2FG64Uncharacterized protein. (285 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (123 aa)
A0A2I2FFK0RNA-binding protein RBM25. (770 aa)
A0A2I2FF86Surp module. (541 aa)
A0A2I2FD50Sm domain-containing protein. (131 aa)
A0A2I2FC74Putative DNA binding protein SART-1. (680 aa)
A0A2I2FBT8Small nuclear ribonucleoprotein Sm D2. (115 aa)
A0A2I2FBK7U1 small nuclear ribonucleo protein of 70kDa MW N terminal-domain-containing protein. (377 aa)
A0A2I2FB00U2 snRNP component prp10. (1227 aa)
A0A2I2FAZ5Spliceosomal protein DIB1; Essential role in pre-mRNA splicing. Also essential for entry into mitosis (G2/M progression) as well as for chromosome segregation during mitosis; Belongs to the DIM1 family. (143 aa)
A0A2I2FAW4A1 cistron-splicing factor. (456 aa)
A0A2I2FAL5Uncharacterized protein. (266 aa)
A0A2I2F980Uncharacterized protein. (354 aa)
A0A2I2F923U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
A0A2I2F8S5PHF5-like protein. (108 aa)
A0A2I2F841Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (133 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (83 aa)
A0A2I2F6R9RNA binding domain protein. (192 aa)
A0A2I2F6I4Putative pre-rRNA processing protein Mrd1. (820 aa)
A0A2I2F6B9Coatamer subunit protein. (812 aa)
A0A2I2F5V4Uncharacterized protein. (76 aa)
A0A2I2F5M7WD domain protein. (1636 aa)
A0A2I2F4N4Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (126 aa)
A0A2I2F4M2PRP1 splicing factor, N-terminal-domain-containing protein. (935 aa)
A0A2I2F4H0RRM domain-containing protein. (113 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (98 aa)
A0A2I2F1Z9Putative nuclear mRNA splicing factor-associated protein. (392 aa)
A0A2I2F1I7RNA-binding domain-containing protein. (353 aa)
A0A2I2F1C2Sm domain-containing protein. (217 aa)
A0A2I2F172Small nuclear ribonucleoprotein G. (78 aa)
A0A2I2F0J3C2H2-type domain-containing protein. (211 aa)
A0A2I2F0J1U4/U6 small nuclear ribonucleo protein. (591 aa)
A0A2I2F098Putative pre-mRNA splicing factor. (529 aa)
A0A2I2F082Pre-mRNA splicing helicase. (2210 aa)
A0A2I2F032Putative U5 snRNP component. (985 aa)
A0A2I2EZH2Splicing factor 3b, subunit 2, 145kD. (547 aa)
A0A2I2EYR8G10 protein. (148 aa)
A0A2I2EYA9Prp18. (365 aa)
A0A2I2EY52PROCN-domain-containing protein. (2515 aa)
Your Current Organism:
Aspergillus candidus
NCBI taxonomy Id: 41067
Other names: A. candidus, CBS 566.65
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