23 items (Aspergillus candidus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A2I2F6F3	TPR-like protein. (1066 aa)
	A0A2I2FF02	Uncharacterized protein. (289 aa)
	A0A2I2FIY4	B-block_TFIIIC domain-containing protein. (1792 aa)
	A0A2I2FK17	RNA polymerase II transcription elongation factor Rtf1p. (599 aa)
	A0A2I2FB93	Uncharacterized protein. (239 aa)
	A0A2I2FKJ6	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1247 aa)
	A0A2I2FKK7	Putative DNA polymerase V. (973 aa)
	A0A2I2FAU7	ECM11 domain-containing protein. (987 aa)
	A0A2I2F972	DNA-directed RNA polymerase subunit E. (169 aa)
	A0A2I2FN19	TBP associated factor. (1909 aa)
	A0A2I2FPD6	DNA directed RNA polymerase. (75 aa)
	A0A2I2F6F5	DNA-directed RNA polymerase I, II, and III subunit Rpb6. (158 aa)
	A0A2I2F1T2	RNA polymerase I-specific transcription initiation factor RRN6-like protein. (975 aa)
	A0A2I2F0G6	Histone H3; Belongs to the histone H3 family. (136 aa)
	A0A2I2F0B7	Putative DNA-directed RNA polymerase III subunit 22.9 kDa. (193 aa)
	A0A2I2F059	Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family. (343 aa)
	A0A2I2EY13	Uncharacterized protein. (938 aa)
	A0A2I2EYX6	DNA-directed RNA polymerase. (143 aa)
	A0A2I2EYY6	Histone-fold-containing protein. (182 aa)
	A0A2I2EZ10	DNA-directed RNA polymerase, subunit N/Rpb10. (74 aa)
	A0A2I2EZQ0	A49-like RNA polymerase I associated factor-domain-containing protein. (497 aa)
	A0A2I2FPZ7	Uncharacterized protein. (669 aa)
	A0A2I2FDX0	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (245 aa)

Your Current Organism:

Aspergillus candidus

NCBI taxonomy Id: 41067
Other names: A. candidus, CBS 566.65

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2I2EY13	A0A2I2EYY6	Uncharacterized protein.	Histone-fold-containing protein.	0.579
A0A2I2EY13	A0A2I2F0G6	Uncharacterized protein.	Histone H3; Belongs to the histone H3 family.	0.579
A0A2I2EYX6	A0A2I2EZ10	DNA-directed RNA polymerase.	DNA-directed RNA polymerase, subunit N/Rpb10.	0.998
A0A2I2EYX6	A0A2I2EZQ0	DNA-directed RNA polymerase.	A49-like RNA polymerase I associated factor-domain-containing protein.	0.990
A0A2I2EYX6	A0A2I2F0B7	DNA-directed RNA polymerase.	Putative DNA-directed RNA polymerase III subunit 22.9 kDa.	0.997
A0A2I2EYX6	A0A2I2F1T2	DNA-directed RNA polymerase.	RNA polymerase I-specific transcription initiation factor RRN6-like protein.	0.622
A0A2I2EYX6	A0A2I2F6F3	DNA-directed RNA polymerase.	TPR-like protein.	0.535
A0A2I2EYX6	A0A2I2F6F5	DNA-directed RNA polymerase.	DNA-directed RNA polymerase I, II, and III subunit Rpb6.	0.998
A0A2I2EYX6	A0A2I2F972	DNA-directed RNA polymerase.	DNA-directed RNA polymerase subunit E.	0.484
A0A2I2EYX6	A0A2I2FAU7	DNA-directed RNA polymerase.	ECM11 domain-containing protein.	0.730
A0A2I2EYX6	A0A2I2FDX0	DNA-directed RNA polymerase.	DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs.	0.981
A0A2I2EYX6	A0A2I2FKJ6	DNA-directed RNA polymerase.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.993
A0A2I2EYX6	A0A2I2FPD6	DNA-directed RNA polymerase.	DNA directed RNA polymerase.	0.996
A0A2I2EYY6	A0A2I2EY13	Histone-fold-containing protein.	Uncharacterized protein.	0.579
A0A2I2EYY6	A0A2I2EZ10	Histone-fold-containing protein.	DNA-directed RNA polymerase, subunit N/Rpb10.	0.926
A0A2I2EYY6	A0A2I2EZQ0	Histone-fold-containing protein.	A49-like RNA polymerase I associated factor-domain-containing protein.	0.602
A0A2I2EYY6	A0A2I2F6F5	Histone-fold-containing protein.	DNA-directed RNA polymerase I, II, and III subunit Rpb6.	0.908
A0A2I2EYY6	A0A2I2F972	Histone-fold-containing protein.	DNA-directed RNA polymerase subunit E.	0.908
A0A2I2EYY6	A0A2I2FK17	Histone-fold-containing protein.	RNA polymerase II transcription elongation factor Rtf1p.	0.793
A0A2I2EYY6	A0A2I2FKJ6	Histone-fold-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.788