STRINGSTRING
GFO_0160 GFO_0160 GFO_0163 GFO_0163 GFO_0164 GFO_0164 ctaC ctaC ctaD ctaD ctaE ctaE cyoC cyoC GFO_0246 GFO_0246 dnk dnk GFO_0813 GFO_0813 GFO_1395 GFO_1395 GFO_1397 GFO_1397 GFO_1398 GFO_1398 GFO_1400 GFO_1400 GFO_1413 GFO_1413 ccoN/ccoO ccoN/ccoO GFO_1434 GFO_1434 ccoP ccoP GFO_1472 GFO_1472 sdhB sdhB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GFO_0160Membrane protein containing cytochrome c domain. (452 aa)
GFO_0163Conserved hypothetical protein, membrane. (173 aa)
GFO_0164Conserved hypothetical protein. (233 aa)
ctaCCytochrome c oxidase subunit II. (395 aa)
ctaDCytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family. (607 aa)
ctaECytochrome c oxidase subunit III. (193 aa)
cyoCCytochrome o ubiquinol oxidase subunit III. (326 aa)
GFO_0246Protein containing HPPK and dNK domain. (378 aa)
dnkDeoxyadenosine kinase. (204 aa)
GFO_0813C550-like class I cytochrome c. (156 aa)
GFO_1395Hypothetical protein. (140 aa)
GFO_1397Cbb3-type cytochrome c oxidase subunit II. (334 aa)
GFO_1398Cbb3-type cytochrome c oxidase subunit I. (602 aa)
GFO_1400Membrane protein. (403 aa)
GFO_1413Protein containing cytochrome c heme binding domain. (166 aa)
ccoN/ccoOCbb3-type cytochrome c oxidase subunit I and II fusion protein; Belongs to the heme-copper respiratory oxidase family. (731 aa)
GFO_1434Hypothetical protein. (70 aa)
ccoPCbb3-type cytochrome c oxidase subunit III. (320 aa)
GFO_1472Ferredoxin-like protein. (117 aa)
sdhBSuccinate dehydrogenase iron-sulfur protein. (247 aa)
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
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