STRINGSTRING
GFO_0148 GFO_0148 GFO_0274 GFO_0274 GFO_0550 GFO_0550 gmd gmd wcaG wcaG GFO_1220 GFO_1220 galE galE GFO_1692 GFO_1692 NeuB NeuB GFO_2022 GFO_2022 GFO_2028 GFO_2028 rmlA rmlA rfbB rfbB GFO_2038 GFO_2038 GFO_2039 GFO_2039 GFO_2041 GFO_2041 GFO_2056 GFO_2056 manC manC GFO_3260 GFO_3260 GFO_3285 GFO_3285 rfbD rfbD rfbC rfbC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
GFO_0148CapI-like UDP-glucuronic acid epimerase. (338 aa)
GFO_0274DegT-like DegT/DnrJ/EryC1/StrS family aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (377 aa)
GFO_0550SpsC-like DegT/DnrJ/EryC1/StrS family aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (364 aa)
gmdGDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (376 aa)
wcaGGDP-L-fucose synthetase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (312 aa)
GFO_1220NAD-dependent epimerase/dehydratase family protein. (311 aa)
galESecreted UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (347 aa)
GFO_1692Phosphomannose isomerase type I. (322 aa)
NeuBN-acetylneuraminate synthase. (346 aa)
GFO_2022Conserved hypothetical protein. (331 aa)
GFO_2028Polysaccharide biosynthesis protein. (338 aa)
rmlAGlucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (290 aa)
rfbBdTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (347 aa)
GFO_2038UDP-glucose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (464 aa)
GFO_2039UDP-glucose/GDP-mannose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (428 aa)
GFO_2041VipB-like polysaccharide biosynthesis protein. (332 aa)
GFO_2056Phosphomannomutase/phosphoglucomutase. (461 aa)
manCMannose-1-phosphate guanylyltransferase [GDP]. (363 aa)
GFO_3260Glucose-1-phosphate thymidylyltransferase. (336 aa)
GFO_3285NAD-dependent epimerase/dehydratase family protein. (329 aa)
rfbDdTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (282 aa)
rfbCdTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (181 aa)
Your Current Organism:
Gramella forsetii
NCBI taxonomy Id: 411154
Other names: Cytophaga sp. KT0803, G. forsetii KT0803, Gramella forsetii KT0803, Gramella forsetii str. KT0803, Gramella forsetii strain KT0803
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.