(25 nodes) Cytosolic large ribosomal subunit network (Solanum tuberosum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M0ZM74_SOLTU	Uncharacterized protein. (51 aa)
	M0ZNS6_SOLTU	Uncharacterized protein. (99 aa)
	M0ZQH0_SOLTU	Uncharacterized protein. (133 aa)
	M0ZRH4_SOLTU	Ribosomal protein L37; Binds to the 23S rRNA. (95 aa)
	M1ABS1_SOLTU	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family. (126 aa)
	M1AIA5_SOLTU	KOW domain-containing protein. (146 aa)
	M1B194_SOLTU	Uncharacterized protein. (240 aa)
	M1BIS3_SOLTU	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (214 aa)
	M1BT69_SOLTU	Ribosomal_L18_c domain-containing protein. (301 aa)
	M1C6I6_SOLTU	Uncharacterized protein. (164 aa)
	M1CAV1_SOLTU	Ribosomal_L18e/L15P domain-containing protein. (187 aa)
	M1CBS3_SOLTU	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (389 aa)
	M1CD37_SOLTU	Uncharacterized protein. (194 aa)
	M1CHW0_SOLTU	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family. (216 aa)
	M1CL91_SOLTU	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family. (60 aa)
	M1CMR6_SOLTU	Ribosomal_L7Ae domain-containing protein. (113 aa)
	M1CP75_SOLTU	Ribos_L4_asso_C domain-containing protein. (406 aa)
	M1CQQ7_SOLTU	TRASH domain-containing protein. (163 aa)
	M1D4J2_SOLTU	Uncharacterized protein. (125 aa)
	M1D4J7_SOLTU	Ribosomal_L18e/L15P domain-containing protein. (187 aa)
	M1D4K6_SOLTU	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (220 aa)
	M1D6Y3_SOLTU	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (166 aa)
	Q307X7_SOLTU	Ribosomal protein PETRP-like; Belongs to the universal ribosomal protein uL22 family. (173 aa)
	RPL13	60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family. (206 aa)
	Q3HVL2_SOLTU	Ribosomal protein L27a-like protein; Belongs to the universal ribosomal protein uL15 family. (148 aa)

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M0ZM74_SOLTU	M0ZNS6_SOLTU	M0ZM74	M0ZNS6	Uncharacterized protein.	Uncharacterized protein.	0.990
M0ZM74_SOLTU	M0ZQH0_SOLTU	M0ZM74	M0ZQH0	Uncharacterized protein.	Uncharacterized protein.	0.985
M0ZM74_SOLTU	M0ZRH4_SOLTU	M0ZM74	M0ZRH4	Uncharacterized protein.	Ribosomal protein L37; Binds to the 23S rRNA.	0.987
M0ZM74_SOLTU	M1ABS1_SOLTU	M0ZM74	M1ABS1	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.	0.991
M0ZM74_SOLTU	M1AIA5_SOLTU	M0ZM74	M1AIA5	Uncharacterized protein.	KOW domain-containing protein.	0.982
M0ZM74_SOLTU	M1B194_SOLTU	M0ZM74	M1B194	Uncharacterized protein.	Uncharacterized protein.	0.979
M0ZM74_SOLTU	M1BIS3_SOLTU	M0ZM74	M1BIS3	Uncharacterized protein.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.989
M0ZM74_SOLTU	M1BT69_SOLTU	M0ZM74	M1BT69	Uncharacterized protein.	Ribosomal_L18_c domain-containing protein.	0.996
M0ZM74_SOLTU	M1C6I6_SOLTU	M0ZM74	M1C6I6	Uncharacterized protein.	Uncharacterized protein.	0.988
M0ZM74_SOLTU	M1CAV1_SOLTU	M0ZM74	M1CAV1	Uncharacterized protein.	Ribosomal_L18e/L15P domain-containing protein.	0.978
M0ZM74_SOLTU	M1CBS3_SOLTU	M0ZM74	M1CBS3	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.973
M0ZM74_SOLTU	M1CD37_SOLTU	M0ZM74	M1CD37	Uncharacterized protein.	Uncharacterized protein.	0.988
M0ZM74_SOLTU	M1CHW0_SOLTU	M0ZM74	M1CHW0	Uncharacterized protein.	Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.	0.987
M0ZM74_SOLTU	M1CL91_SOLTU	M0ZM74	M1CL91	Uncharacterized protein.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.997
M0ZM74_SOLTU	M1CMR6_SOLTU	M0ZM74	M1CMR6	Uncharacterized protein.	Ribosomal_L7Ae domain-containing protein.	0.991
M0ZM74_SOLTU	M1CP75_SOLTU	M0ZM74	M1CP75	Uncharacterized protein.	Ribos_L4_asso_C domain-containing protein.	0.981
M0ZM74_SOLTU	M1CQQ7_SOLTU	M0ZM74	M1CQQ7	Uncharacterized protein.	TRASH domain-containing protein.	0.981
M0ZM74_SOLTU	M1D4J2_SOLTU	M0ZM74	M1D4J2	Uncharacterized protein.	Uncharacterized protein.	0.984
M0ZM74_SOLTU	M1D4J7_SOLTU	M0ZM74	M1D4J7	Uncharacterized protein.	Ribosomal_L18e/L15P domain-containing protein.	0.978
M0ZM74_SOLTU	M1D4K6_SOLTU	M0ZM74	M1D4K6	Uncharacterized protein.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.989