(11 nodes) Mixed, incl. Positive regulation of post-transcriptional gene silencing, and Annealing activity network (Solanum tuberosum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M0ZNT0_SOLTU	Uncharacterized protein. (995 aa)
	M0ZUW2_SOLTU	Uncharacterized protein. (548 aa)
	M0ZUW3_SOLTU	Helicase ATP-binding domain-containing protein. (297 aa)
	M1A0E0_SOLTU	Helicase C-terminal domain-containing protein. (181 aa)
	M1A8T4_SOLTU	Uncharacterized protein. (623 aa)
	M1A8T6_SOLTU	Uncharacterized protein. (1205 aa)
	M1ALD3_SOLTU	Helicase C-terminal domain-containing protein. (139 aa)
	M1APR1_SOLTU	Uncharacterized protein. (656 aa)
	M1AYY1_SOLTU	Helicase C-terminal domain-containing protein. (145 aa)
	M1B7D3_SOLTU	Uncharacterized protein. (1106 aa)
	M1CG93_SOLTU	Helicase ATP-binding domain-containing protein. (371 aa)

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M0ZNT0_SOLTU	M0ZUW2_SOLTU	M0ZNT0	M0ZUW2	Uncharacterized protein.	Uncharacterized protein.	0.559
M0ZNT0_SOLTU	M0ZUW3_SOLTU	M0ZNT0	M0ZUW3	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.558
M0ZNT0_SOLTU	M1A0E0_SOLTU	M0ZNT0	M1A0E0	Uncharacterized protein.	Helicase C-terminal domain-containing protein.	0.619
M0ZNT0_SOLTU	M1ALD3_SOLTU	M0ZNT0	M1ALD3	Uncharacterized protein.	Helicase C-terminal domain-containing protein.	0.560
M0ZNT0_SOLTU	M1APR1_SOLTU	M0ZNT0	M1APR1	Uncharacterized protein.	Uncharacterized protein.	0.503
M0ZNT0_SOLTU	M1CG93_SOLTU	M0ZNT0	M1CG93	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.591
M0ZUW2_SOLTU	M0ZNT0_SOLTU	M0ZUW2	M0ZNT0	Uncharacterized protein.	Uncharacterized protein.	0.559
M0ZUW2_SOLTU	M1A8T4_SOLTU	M0ZUW2	M1A8T4	Uncharacterized protein.	Uncharacterized protein.	0.559
M0ZUW2_SOLTU	M1A8T6_SOLTU	M0ZUW2	M1A8T6	Uncharacterized protein.	Uncharacterized protein.	0.560
M0ZUW2_SOLTU	M1AYY1_SOLTU	M0ZUW2	M1AYY1	Uncharacterized protein.	Helicase C-terminal domain-containing protein.	0.559
M0ZUW2_SOLTU	M1B7D3_SOLTU	M0ZUW2	M1B7D3	Uncharacterized protein.	Uncharacterized protein.	0.560
M0ZUW2_SOLTU	M1CG93_SOLTU	M0ZUW2	M1CG93	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.559
M0ZUW3_SOLTU	M0ZNT0_SOLTU	M0ZUW3	M0ZNT0	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.558
M0ZUW3_SOLTU	M1A0E0_SOLTU	M0ZUW3	M1A0E0	Helicase ATP-binding domain-containing protein.	Helicase C-terminal domain-containing protein.	0.555
M0ZUW3_SOLTU	M1A8T4_SOLTU	M0ZUW3	M1A8T4	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.556
M0ZUW3_SOLTU	M1A8T6_SOLTU	M0ZUW3	M1A8T6	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.558
M0ZUW3_SOLTU	M1AYY1_SOLTU	M0ZUW3	M1AYY1	Helicase ATP-binding domain-containing protein.	Helicase C-terminal domain-containing protein.	0.558
M0ZUW3_SOLTU	M1B7D3_SOLTU	M0ZUW3	M1B7D3	Helicase ATP-binding domain-containing protein.	Uncharacterized protein.	0.558
M1A0E0_SOLTU	M0ZNT0_SOLTU	M1A0E0	M0ZNT0	Helicase C-terminal domain-containing protein.	Uncharacterized protein.	0.619
M1A0E0_SOLTU	M0ZUW3_SOLTU	M1A0E0	M0ZUW3	Helicase C-terminal domain-containing protein.	Helicase ATP-binding domain-containing protein.	0.555