(8 nodes) RDM1 superfamily, and Pre-transcriptional gene silencing by RNA network (Solanum tuberosum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M1AIM4_SOLTU	Uncharacterized protein. (73 aa)
	M1B2U0_SOLTU	Uncharacterized protein. (105 aa)
	M1CT10_SOLTU	Uncharacterized protein. (119 aa)
	M1CT11_SOLTU	Uncharacterized protein. (176 aa)
	M1D1X3_SOLTU	Uncharacterized protein. (925 aa)
	M1DJ63_SOLTU	Uncharacterized protein. (119 aa)
	M1DJW7_SOLTU	Uncharacterized protein. (109 aa)
	M1DM06_SOLTU	Uncharacterized protein. (114 aa)

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M1AIM4_SOLTU	M1B2U0_SOLTU	M1AIM4	M1B2U0	Uncharacterized protein.	Uncharacterized protein.	0.743
M1AIM4_SOLTU	M1CT10_SOLTU	M1AIM4	M1CT10	Uncharacterized protein.	Uncharacterized protein.	0.743
M1AIM4_SOLTU	M1CT11_SOLTU	M1AIM4	M1CT11	Uncharacterized protein.	Uncharacterized protein.	0.743
M1AIM4_SOLTU	M1DJ63_SOLTU	M1AIM4	M1DJ63	Uncharacterized protein.	Uncharacterized protein.	0.743
M1AIM4_SOLTU	M1DJW7_SOLTU	M1AIM4	M1DJW7	Uncharacterized protein.	Uncharacterized protein.	0.743
M1AIM4_SOLTU	M1DM06_SOLTU	M1AIM4	M1DM06	Uncharacterized protein.	Uncharacterized protein.	0.743
M1B2U0_SOLTU	M1AIM4_SOLTU	M1B2U0	M1AIM4	Uncharacterized protein.	Uncharacterized protein.	0.743
M1B2U0_SOLTU	M1CT10_SOLTU	M1B2U0	M1CT10	Uncharacterized protein.	Uncharacterized protein.	0.540
M1B2U0_SOLTU	M1CT11_SOLTU	M1B2U0	M1CT11	Uncharacterized protein.	Uncharacterized protein.	0.540
M1B2U0_SOLTU	M1D1X3_SOLTU	M1B2U0	M1D1X3	Uncharacterized protein.	Uncharacterized protein.	0.715
M1B2U0_SOLTU	M1DJ63_SOLTU	M1B2U0	M1DJ63	Uncharacterized protein.	Uncharacterized protein.	0.540
M1B2U0_SOLTU	M1DJW7_SOLTU	M1B2U0	M1DJW7	Uncharacterized protein.	Uncharacterized protein.	0.540
M1B2U0_SOLTU	M1DM06_SOLTU	M1B2U0	M1DM06	Uncharacterized protein.	Uncharacterized protein.	0.540
M1CT10_SOLTU	M1AIM4_SOLTU	M1CT10	M1AIM4	Uncharacterized protein.	Uncharacterized protein.	0.743
M1CT10_SOLTU	M1B2U0_SOLTU	M1CT10	M1B2U0	Uncharacterized protein.	Uncharacterized protein.	0.540
M1CT10_SOLTU	M1CT11_SOLTU	M1CT10	M1CT11	Uncharacterized protein.	Uncharacterized protein.	0.540
M1CT10_SOLTU	M1D1X3_SOLTU	M1CT10	M1D1X3	Uncharacterized protein.	Uncharacterized protein.	0.715
M1CT10_SOLTU	M1DJ63_SOLTU	M1CT10	M1DJ63	Uncharacterized protein.	Uncharacterized protein.	0.540
M1CT10_SOLTU	M1DJW7_SOLTU	M1CT10	M1DJW7	Uncharacterized protein.	Uncharacterized protein.	0.540
M1CT10_SOLTU	M1DM06_SOLTU	M1CT10	M1DM06	Uncharacterized protein.	Uncharacterized protein.	0.540