5 items (Solanum tuberosum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M0ZTG2_SOLTU	Uncharacterized protein. (193 aa)
	M0ZZD4_SOLTU	Uncharacterized protein. (87 aa)
	M1A3S2_SOLTU	Uncharacterized protein; Belongs to the calmodulin family. (122 aa)
	M1ABV1_SOLTU	Uncharacterized protein. (116 aa)
	M1C417_SOLTU	Uncharacterized protein. (157 aa)

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M0ZTG2_SOLTU	M0ZZD4_SOLTU	M0ZTG2	M0ZZD4	Uncharacterized protein.	Uncharacterized protein.	0.564
M0ZTG2_SOLTU	M1ABV1_SOLTU	M0ZTG2	M1ABV1	Uncharacterized protein.	Uncharacterized protein.	0.578
M0ZZD4_SOLTU	M0ZTG2_SOLTU	M0ZZD4	M0ZTG2	Uncharacterized protein.	Uncharacterized protein.	0.564
M0ZZD4_SOLTU	M1A3S2_SOLTU	M0ZZD4	M1A3S2	Uncharacterized protein.	Uncharacterized protein; Belongs to the calmodulin family.	0.686
M0ZZD4_SOLTU	M1ABV1_SOLTU	M0ZZD4	M1ABV1	Uncharacterized protein.	Uncharacterized protein.	0.622
M0ZZD4_SOLTU	M1C417_SOLTU	M0ZZD4	M1C417	Uncharacterized protein.	Uncharacterized protein.	0.619
M1A3S2_SOLTU	M0ZZD4_SOLTU	M1A3S2	M0ZZD4	Uncharacterized protein; Belongs to the calmodulin family.	Uncharacterized protein.	0.686
M1A3S2_SOLTU	M1ABV1_SOLTU	M1A3S2	M1ABV1	Uncharacterized protein; Belongs to the calmodulin family.	Uncharacterized protein.	0.495
M1A3S2_SOLTU	M1C417_SOLTU	M1A3S2	M1C417	Uncharacterized protein; Belongs to the calmodulin family.	Uncharacterized protein.	0.496
M1ABV1_SOLTU	M0ZTG2_SOLTU	M1ABV1	M0ZTG2	Uncharacterized protein.	Uncharacterized protein.	0.578
M1ABV1_SOLTU	M0ZZD4_SOLTU	M1ABV1	M0ZZD4	Uncharacterized protein.	Uncharacterized protein.	0.622
M1ABV1_SOLTU	M1A3S2_SOLTU	M1ABV1	M1A3S2	Uncharacterized protein.	Uncharacterized protein; Belongs to the calmodulin family.	0.495
M1ABV1_SOLTU	M1C417_SOLTU	M1ABV1	M1C417	Uncharacterized protein.	Uncharacterized protein.	0.532
M1C417_SOLTU	M0ZZD4_SOLTU	M1C417	M0ZZD4	Uncharacterized protein.	Uncharacterized protein.	0.619
M1C417_SOLTU	M1A3S2_SOLTU	M1C417	M1A3S2	Uncharacterized protein.	Uncharacterized protein; Belongs to the calmodulin family.	0.496
M1C417_SOLTU	M1ABV1_SOLTU	M1C417	M1ABV1	Uncharacterized protein.	Uncharacterized protein.	0.532