(5 nodes) Mitochondrial small ribosomal subunit network (Solanum tuberosum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M1A4Q8_SOLTU	MRP-S28 domain-containing protein. (433 aa)
	M1ARB8_SOLTU	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family. (267 aa)
	M1BC62_SOLTU	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (502 aa)
	M1C6M4_SOLTU	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (386 aa)
	M1CZE9_SOLTU	Uncharacterized protein. (452 aa)

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M1A4Q8_SOLTU	M1ARB8_SOLTU	M1A4Q8	M1ARB8	MRP-S28 domain-containing protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	0.975
M1A4Q8_SOLTU	M1BC62_SOLTU	M1A4Q8	M1BC62	MRP-S28 domain-containing protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.997
M1A4Q8_SOLTU	M1C6M4_SOLTU	M1A4Q8	M1C6M4	MRP-S28 domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.982
M1A4Q8_SOLTU	M1CZE9_SOLTU	M1A4Q8	M1CZE9	MRP-S28 domain-containing protein.	Uncharacterized protein.	0.987
M1ARB8_SOLTU	M1A4Q8_SOLTU	M1ARB8	M1A4Q8	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	MRP-S28 domain-containing protein.	0.975
M1ARB8_SOLTU	M1BC62_SOLTU	M1ARB8	M1BC62	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.988
M1ARB8_SOLTU	M1C6M4_SOLTU	M1ARB8	M1C6M4	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.975
M1ARB8_SOLTU	M1CZE9_SOLTU	M1ARB8	M1CZE9	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	Uncharacterized protein.	0.986
M1BC62_SOLTU	M1A4Q8_SOLTU	M1BC62	M1A4Q8	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	MRP-S28 domain-containing protein.	0.997
M1BC62_SOLTU	M1ARB8_SOLTU	M1BC62	M1ARB8	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	0.988
M1BC62_SOLTU	M1C6M4_SOLTU	M1BC62	M1C6M4	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.996
M1BC62_SOLTU	M1CZE9_SOLTU	M1BC62	M1CZE9	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.999
M1C6M4_SOLTU	M1A4Q8_SOLTU	M1C6M4	M1A4Q8	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	MRP-S28 domain-containing protein.	0.982
M1C6M4_SOLTU	M1ARB8_SOLTU	M1C6M4	M1ARB8	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	0.975
M1C6M4_SOLTU	M1BC62_SOLTU	M1C6M4	M1BC62	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.996
M1C6M4_SOLTU	M1CZE9_SOLTU	M1C6M4	M1CZE9	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein.	0.991
M1CZE9_SOLTU	M1A4Q8_SOLTU	M1CZE9	M1A4Q8	Uncharacterized protein.	MRP-S28 domain-containing protein.	0.987
M1CZE9_SOLTU	M1ARB8_SOLTU	M1CZE9	M1ARB8	Uncharacterized protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	0.986
M1CZE9_SOLTU	M1BC62_SOLTU	M1CZE9	M1BC62	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.999
M1CZE9_SOLTU	M1C6M4_SOLTU	M1CZE9	M1C6M4	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.991