(5 nodes) Mixed, incl. Ribosomal protein L34, and Mitochondrial ribosomal protein L37 network (Solanum tuberosum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M1A161_SOLTU	Uncharacterized protein. (145 aa)
	M1ATL4_SOLTU	Uncharacterized protein. (53 aa)
	M1BBR5_SOLTU	Uncharacterized protein. (131 aa)
	M1C487_SOLTU	Uncharacterized protein. (134 aa)
	M1C6C4_SOLTU	L51_S25_CI-B8 domain-containing protein. (119 aa)

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M1A161_SOLTU	M1ATL4_SOLTU	M1A161	M1ATL4	Uncharacterized protein.	Uncharacterized protein.	0.895
M1A161_SOLTU	M1BBR5_SOLTU	M1A161	M1BBR5	Uncharacterized protein.	Uncharacterized protein.	0.922
M1A161_SOLTU	M1C487_SOLTU	M1A161	M1C487	Uncharacterized protein.	Uncharacterized protein.	0.936
M1A161_SOLTU	M1C6C4_SOLTU	M1A161	M1C6C4	Uncharacterized protein.	L51_S25_CI-B8 domain-containing protein.	0.977
M1ATL4_SOLTU	M1A161_SOLTU	M1ATL4	M1A161	Uncharacterized protein.	Uncharacterized protein.	0.895
M1ATL4_SOLTU	M1BBR5_SOLTU	M1ATL4	M1BBR5	Uncharacterized protein.	Uncharacterized protein.	0.858
M1ATL4_SOLTU	M1C487_SOLTU	M1ATL4	M1C487	Uncharacterized protein.	Uncharacterized protein.	0.816
M1ATL4_SOLTU	M1C6C4_SOLTU	M1ATL4	M1C6C4	Uncharacterized protein.	L51_S25_CI-B8 domain-containing protein.	0.912
M1BBR5_SOLTU	M1A161_SOLTU	M1BBR5	M1A161	Uncharacterized protein.	Uncharacterized protein.	0.922
M1BBR5_SOLTU	M1ATL4_SOLTU	M1BBR5	M1ATL4	Uncharacterized protein.	Uncharacterized protein.	0.858
M1BBR5_SOLTU	M1C487_SOLTU	M1BBR5	M1C487	Uncharacterized protein.	Uncharacterized protein.	0.937
M1BBR5_SOLTU	M1C6C4_SOLTU	M1BBR5	M1C6C4	Uncharacterized protein.	L51_S25_CI-B8 domain-containing protein.	0.945
M1C487_SOLTU	M1A161_SOLTU	M1C487	M1A161	Uncharacterized protein.	Uncharacterized protein.	0.936
M1C487_SOLTU	M1ATL4_SOLTU	M1C487	M1ATL4	Uncharacterized protein.	Uncharacterized protein.	0.816
M1C487_SOLTU	M1BBR5_SOLTU	M1C487	M1BBR5	Uncharacterized protein.	Uncharacterized protein.	0.937
M1C487_SOLTU	M1C6C4_SOLTU	M1C487	M1C6C4	Uncharacterized protein.	L51_S25_CI-B8 domain-containing protein.	0.940
M1C6C4_SOLTU	M1A161_SOLTU	M1C6C4	M1A161	L51_S25_CI-B8 domain-containing protein.	Uncharacterized protein.	0.977
M1C6C4_SOLTU	M1ATL4_SOLTU	M1C6C4	M1ATL4	L51_S25_CI-B8 domain-containing protein.	Uncharacterized protein.	0.912
M1C6C4_SOLTU	M1BBR5_SOLTU	M1C6C4	M1BBR5	L51_S25_CI-B8 domain-containing protein.	Uncharacterized protein.	0.945
M1C6C4_SOLTU	M1C487_SOLTU	M1C6C4	M1C487	L51_S25_CI-B8 domain-containing protein.	Uncharacterized protein.	0.940