(5 nodes) SPOC domain, and Kelch motif network (Solanum tuberosum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M1B1S6_SOLTU	F-box domain-containing protein. (371 aa)
	M1BRI5_SOLTU	Uncharacterized protein. (502 aa)
	M1BS08_SOLTU	Uncharacterized protein. (512 aa)
	M1DP89_SOLTU	Uncharacterized protein. (386 aa)
	M1DU36_SOLTU	SPOC domain-containing protein. (258 aa)

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M1B1S6_SOLTU	M1DP89_SOLTU	M1B1S6	M1DP89	F-box domain-containing protein.	Uncharacterized protein.	0.501
M1B1S6_SOLTU	M1DU36_SOLTU	M1B1S6	M1DU36	F-box domain-containing protein.	SPOC domain-containing protein.	0.501
M1BRI5_SOLTU	M1DP89_SOLTU	M1BRI5	M1DP89	Uncharacterized protein.	Uncharacterized protein.	0.416
M1BRI5_SOLTU	M1DU36_SOLTU	M1BRI5	M1DU36	Uncharacterized protein.	SPOC domain-containing protein.	0.416
M1BS08_SOLTU	M1DP89_SOLTU	M1BS08	M1DP89	Uncharacterized protein.	Uncharacterized protein.	0.416
M1BS08_SOLTU	M1DU36_SOLTU	M1BS08	M1DU36	Uncharacterized protein.	SPOC domain-containing protein.	0.416
M1DP89_SOLTU	M1B1S6_SOLTU	M1DP89	M1B1S6	Uncharacterized protein.	F-box domain-containing protein.	0.501
M1DP89_SOLTU	M1BRI5_SOLTU	M1DP89	M1BRI5	Uncharacterized protein.	Uncharacterized protein.	0.416
M1DP89_SOLTU	M1BS08_SOLTU	M1DP89	M1BS08	Uncharacterized protein.	Uncharacterized protein.	0.416
M1DU36_SOLTU	M1B1S6_SOLTU	M1DU36	M1B1S6	SPOC domain-containing protein.	F-box domain-containing protein.	0.501
M1DU36_SOLTU	M1BRI5_SOLTU	M1DU36	M1BRI5	SPOC domain-containing protein.	Uncharacterized protein.	0.416
M1DU36_SOLTU	M1BS08_SOLTU	M1DU36	M1BS08	SPOC domain-containing protein.	Uncharacterized protein.	0.416