(10 nodes) Ras GTPase-activating protein-binding protein, and Ubiquitin carboxyl-terminal hydrolase network (Solanum tuberosum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M0ZM69_SOLTU	Uncharacterized protein. (494 aa)
	M0ZMB2_SOLTU	Uncharacterized protein. (469 aa)
	M1AYQ0_SOLTU	UCH domain-containing protein. (355 aa)
	M1AYQ1_SOLTU	UCH domain-containing protein. (167 aa)
	M1AYQ3_SOLTU	UCH domain-containing protein. (141 aa)
	M1AYQ4_SOLTU	UCH domain-containing protein. (183 aa)
	M1BSG7_SOLTU	Uncharacterized protein. (463 aa)
	M1BSI9_SOLTU	Uncharacterized protein. (477 aa)
	M1BUK4_SOLTU	NTF2 domain-containing protein. (256 aa)
	M1CPC7_SOLTU	Uncharacterized protein. (480 aa)

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M0ZM69_SOLTU	M1AYQ0_SOLTU	M0ZM69	M1AYQ0	Uncharacterized protein.	UCH domain-containing protein.	0.659
M0ZM69_SOLTU	M1AYQ1_SOLTU	M0ZM69	M1AYQ1	Uncharacterized protein.	UCH domain-containing protein.	0.659
M0ZM69_SOLTU	M1AYQ3_SOLTU	M0ZM69	M1AYQ3	Uncharacterized protein.	UCH domain-containing protein.	0.659
M0ZM69_SOLTU	M1AYQ4_SOLTU	M0ZM69	M1AYQ4	Uncharacterized protein.	UCH domain-containing protein.	0.659
M0ZMB2_SOLTU	M1AYQ0_SOLTU	M0ZMB2	M1AYQ0	Uncharacterized protein.	UCH domain-containing protein.	0.661
M0ZMB2_SOLTU	M1AYQ1_SOLTU	M0ZMB2	M1AYQ1	Uncharacterized protein.	UCH domain-containing protein.	0.661
M0ZMB2_SOLTU	M1AYQ3_SOLTU	M0ZMB2	M1AYQ3	Uncharacterized protein.	UCH domain-containing protein.	0.661
M0ZMB2_SOLTU	M1AYQ4_SOLTU	M0ZMB2	M1AYQ4	Uncharacterized protein.	UCH domain-containing protein.	0.661
M1AYQ0_SOLTU	M0ZM69_SOLTU	M1AYQ0	M0ZM69	UCH domain-containing protein.	Uncharacterized protein.	0.659
M1AYQ0_SOLTU	M0ZMB2_SOLTU	M1AYQ0	M0ZMB2	UCH domain-containing protein.	Uncharacterized protein.	0.661
M1AYQ0_SOLTU	M1BSG7_SOLTU	M1AYQ0	M1BSG7	UCH domain-containing protein.	Uncharacterized protein.	0.661
M1AYQ0_SOLTU	M1BSI9_SOLTU	M1AYQ0	M1BSI9	UCH domain-containing protein.	Uncharacterized protein.	0.659
M1AYQ0_SOLTU	M1BUK4_SOLTU	M1AYQ0	M1BUK4	UCH domain-containing protein.	NTF2 domain-containing protein.	0.659
M1AYQ0_SOLTU	M1CPC7_SOLTU	M1AYQ0	M1CPC7	UCH domain-containing protein.	Uncharacterized protein.	0.659
M1AYQ1_SOLTU	M0ZM69_SOLTU	M1AYQ1	M0ZM69	UCH domain-containing protein.	Uncharacterized protein.	0.659
M1AYQ1_SOLTU	M0ZMB2_SOLTU	M1AYQ1	M0ZMB2	UCH domain-containing protein.	Uncharacterized protein.	0.661
M1AYQ1_SOLTU	M1BSG7_SOLTU	M1AYQ1	M1BSG7	UCH domain-containing protein.	Uncharacterized protein.	0.661
M1AYQ1_SOLTU	M1BSI9_SOLTU	M1AYQ1	M1BSI9	UCH domain-containing protein.	Uncharacterized protein.	0.659
M1AYQ1_SOLTU	M1BUK4_SOLTU	M1AYQ1	M1BUK4	UCH domain-containing protein.	NTF2 domain-containing protein.	0.659
M1AYQ1_SOLTU	M1CPC7_SOLTU	M1AYQ1	M1CPC7	UCH domain-containing protein.	Uncharacterized protein.	0.659