27 items (Solanum tuberosum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M0ZUX7_SOLTU	Uncharacterized protein. (164 aa)
	M1A5B6_SOLTU	Reverse transcriptase Ty1/copia-type domain-containing protein. (352 aa)
	M1A664_SOLTU	Uncharacterized protein. (100 aa)
	M1A7P8_SOLTU	Uncharacterized protein. (99 aa)
	M1AGK2_SOLTU	Uncharacterized protein. (245 aa)
	M1AR77_SOLTU	Integrase catalytic domain-containing protein. (206 aa)
	M1AVM4_SOLTU	Uncharacterized protein. (163 aa)
	M1AZF9_SOLTU	Reverse transcriptase Ty1/copia-type domain-containing protein. (156 aa)
	M1B084_SOLTU	Reverse transcriptase Ty1/copia-type domain-containing protein. (123 aa)
	M1B1W5_SOLTU	Uncharacterized protein. (485 aa)
	M1BMX3_SOLTU	Gag_pre-integrs domain-containing protein. (181 aa)
	M1BRP8_SOLTU	Uncharacterized protein. (191 aa)
	M1BZ62_SOLTU	Uncharacterized protein. (123 aa)
	M1BZG8_SOLTU	Uncharacterized protein. (249 aa)
	M1C2H1_SOLTU	Reverse transcriptase Ty1/copia-type domain-containing protein. (220 aa)
	M1C2J2_SOLTU	Uncharacterized protein. (208 aa)
	M1C4P9_SOLTU	Reverse transcriptase Ty1/copia-type domain-containing protein. (367 aa)
	M1C8D2_SOLTU	Gag_pre-integrs domain-containing protein. (216 aa)
	M1CDU4_SOLTU	Uncharacterized protein. (72 aa)
	M1CU18_SOLTU	Uncharacterized protein. (281 aa)
	M1CVN7_SOLTU	Uncharacterized protein. (195 aa)
	M1CW99_SOLTU	Uncharacterized protein. (1051 aa)
	M1D6V6_SOLTU	Uncharacterized protein. (88 aa)
	M1D8Y3_SOLTU	Integrase catalytic domain-containing protein. (738 aa)
	M1DII2_SOLTU	Uncharacterized protein. (292 aa)
	M1DK54_SOLTU	Reverse transcriptase Ty1/copia-type domain-containing protein. (458 aa)
	M1DKM4_SOLTU	Integrase catalytic domain-containing protein. (182 aa)

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M0ZUX7_SOLTU	M1A664_SOLTU	M0ZUX7	M1A664	Uncharacterized protein.	Uncharacterized protein.	0.506
M0ZUX7_SOLTU	M1A7P8_SOLTU	M0ZUX7	M1A7P8	Uncharacterized protein.	Uncharacterized protein.	0.524
M0ZUX7_SOLTU	M1AR77_SOLTU	M0ZUX7	M1AR77	Uncharacterized protein.	Integrase catalytic domain-containing protein.	0.482
M0ZUX7_SOLTU	M1AZF9_SOLTU	M0ZUX7	M1AZF9	Uncharacterized protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.495
M0ZUX7_SOLTU	M1B084_SOLTU	M0ZUX7	M1B084	Uncharacterized protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.476
M0ZUX7_SOLTU	M1B1W5_SOLTU	M0ZUX7	M1B1W5	Uncharacterized protein.	Uncharacterized protein.	0.484
M0ZUX7_SOLTU	M1BMX3_SOLTU	M0ZUX7	M1BMX3	Uncharacterized protein.	Gag_pre-integrs domain-containing protein.	0.465
M0ZUX7_SOLTU	M1BRP8_SOLTU	M0ZUX7	M1BRP8	Uncharacterized protein.	Uncharacterized protein.	0.495
M0ZUX7_SOLTU	M1C2H1_SOLTU	M0ZUX7	M1C2H1	Uncharacterized protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.478
M0ZUX7_SOLTU	M1C4P9_SOLTU	M0ZUX7	M1C4P9	Uncharacterized protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.474
M0ZUX7_SOLTU	M1C8D2_SOLTU	M0ZUX7	M1C8D2	Uncharacterized protein.	Gag_pre-integrs domain-containing protein.	0.504
M0ZUX7_SOLTU	M1CDU4_SOLTU	M0ZUX7	M1CDU4	Uncharacterized protein.	Uncharacterized protein.	0.453
M0ZUX7_SOLTU	M1D6V6_SOLTU	M0ZUX7	M1D6V6	Uncharacterized protein.	Uncharacterized protein.	0.521
M0ZUX7_SOLTU	M1D8Y3_SOLTU	M0ZUX7	M1D8Y3	Uncharacterized protein.	Integrase catalytic domain-containing protein.	0.467
M0ZUX7_SOLTU	M1DII2_SOLTU	M0ZUX7	M1DII2	Uncharacterized protein.	Uncharacterized protein.	0.517
M0ZUX7_SOLTU	M1DK54_SOLTU	M0ZUX7	M1DK54	Uncharacterized protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.448
M0ZUX7_SOLTU	M1DKM4_SOLTU	M0ZUX7	M1DKM4	Uncharacterized protein.	Integrase catalytic domain-containing protein.	0.481
M1A5B6_SOLTU	M1AR77_SOLTU	M1A5B6	M1AR77	Reverse transcriptase Ty1/copia-type domain-containing protein.	Integrase catalytic domain-containing protein.	0.528
M1A5B6_SOLTU	M1AZF9_SOLTU	M1A5B6	M1AZF9	Reverse transcriptase Ty1/copia-type domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.536
M1A5B6_SOLTU	M1B1W5_SOLTU	M1A5B6	M1B1W5	Reverse transcriptase Ty1/copia-type domain-containing protein.	Uncharacterized protein.	0.512