13 items (Solanum tuberosum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M0ZUX7_SOLTU	Uncharacterized protein. (164 aa)
	M1A664_SOLTU	Uncharacterized protein. (100 aa)
	M1A7P8_SOLTU	Uncharacterized protein. (99 aa)
	M1AGK2_SOLTU	Uncharacterized protein. (245 aa)
	M1AVM4_SOLTU	Uncharacterized protein. (163 aa)
	M1AZF9_SOLTU	Reverse transcriptase Ty1/copia-type domain-containing protein. (156 aa)
	M1B084_SOLTU	Reverse transcriptase Ty1/copia-type domain-containing protein. (123 aa)
	M1B1W5_SOLTU	Uncharacterized protein. (485 aa)
	M1C4P9_SOLTU	Reverse transcriptase Ty1/copia-type domain-containing protein. (367 aa)
	M1CDU4_SOLTU	Uncharacterized protein. (72 aa)
	M1D6V6_SOLTU	Uncharacterized protein. (88 aa)
	M1D8Y3_SOLTU	Integrase catalytic domain-containing protein. (738 aa)
	M1DII2_SOLTU	Uncharacterized protein. (292 aa)

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M0ZUX7_SOLTU	M1A664_SOLTU	M0ZUX7	M1A664	Uncharacterized protein.	Uncharacterized protein.	0.506
M0ZUX7_SOLTU	M1A7P8_SOLTU	M0ZUX7	M1A7P8	Uncharacterized protein.	Uncharacterized protein.	0.524
M0ZUX7_SOLTU	M1AZF9_SOLTU	M0ZUX7	M1AZF9	Uncharacterized protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.495
M0ZUX7_SOLTU	M1B084_SOLTU	M0ZUX7	M1B084	Uncharacterized protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.476
M0ZUX7_SOLTU	M1B1W5_SOLTU	M0ZUX7	M1B1W5	Uncharacterized protein.	Uncharacterized protein.	0.484
M0ZUX7_SOLTU	M1C4P9_SOLTU	M0ZUX7	M1C4P9	Uncharacterized protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.474
M0ZUX7_SOLTU	M1CDU4_SOLTU	M0ZUX7	M1CDU4	Uncharacterized protein.	Uncharacterized protein.	0.453
M0ZUX7_SOLTU	M1D6V6_SOLTU	M0ZUX7	M1D6V6	Uncharacterized protein.	Uncharacterized protein.	0.521
M0ZUX7_SOLTU	M1D8Y3_SOLTU	M0ZUX7	M1D8Y3	Uncharacterized protein.	Integrase catalytic domain-containing protein.	0.467
M0ZUX7_SOLTU	M1DII2_SOLTU	M0ZUX7	M1DII2	Uncharacterized protein.	Uncharacterized protein.	0.517
M1A664_SOLTU	M0ZUX7_SOLTU	M1A664	M0ZUX7	Uncharacterized protein.	Uncharacterized protein.	0.506
M1A664_SOLTU	M1A7P8_SOLTU	M1A664	M1A7P8	Uncharacterized protein.	Uncharacterized protein.	0.530
M1A664_SOLTU	M1AGK2_SOLTU	M1A664	M1AGK2	Uncharacterized protein.	Uncharacterized protein.	0.536
M1A664_SOLTU	M1AVM4_SOLTU	M1A664	M1AVM4	Uncharacterized protein.	Uncharacterized protein.	0.536
M1A664_SOLTU	M1AZF9_SOLTU	M1A664	M1AZF9	Uncharacterized protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.535
M1A664_SOLTU	M1B084_SOLTU	M1A664	M1B084	Uncharacterized protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.496
M1A664_SOLTU	M1B1W5_SOLTU	M1A664	M1B1W5	Uncharacterized protein.	Uncharacterized protein.	0.520
M1A664_SOLTU	M1CDU4_SOLTU	M1A664	M1CDU4	Uncharacterized protein.	Uncharacterized protein.	0.511
M1A664_SOLTU	M1D6V6_SOLTU	M1A664	M1D6V6	Uncharacterized protein.	Uncharacterized protein.	0.452
M1A664_SOLTU	M1D8Y3_SOLTU	M1A664	M1D8Y3	Uncharacterized protein.	Integrase catalytic domain-containing protein.	0.526