11 items (Solanum tuberosum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M1A5B6_SOLTU	Reverse transcriptase Ty1/copia-type domain-containing protein. (352 aa)
	M1AR77_SOLTU	Integrase catalytic domain-containing protein. (206 aa)
	M1BMX3_SOLTU	Gag_pre-integrs domain-containing protein. (181 aa)
	M1BZG8_SOLTU	Uncharacterized protein. (249 aa)
	M1C2H1_SOLTU	Reverse transcriptase Ty1/copia-type domain-containing protein. (220 aa)
	M1C2J2_SOLTU	Uncharacterized protein. (208 aa)
	M1C8D2_SOLTU	Gag_pre-integrs domain-containing protein. (216 aa)
	M1CU18_SOLTU	Uncharacterized protein. (281 aa)
	M1CVN7_SOLTU	Uncharacterized protein. (195 aa)
	M1DK54_SOLTU	Reverse transcriptase Ty1/copia-type domain-containing protein. (458 aa)
	M1DKM4_SOLTU	Integrase catalytic domain-containing protein. (182 aa)

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M1A5B6_SOLTU	M1AR77_SOLTU	M1A5B6	M1AR77	Reverse transcriptase Ty1/copia-type domain-containing protein.	Integrase catalytic domain-containing protein.	0.528
M1A5B6_SOLTU	M1BMX3_SOLTU	M1A5B6	M1BMX3	Reverse transcriptase Ty1/copia-type domain-containing protein.	Gag_pre-integrs domain-containing protein.	0.402
M1A5B6_SOLTU	M1C2H1_SOLTU	M1A5B6	M1C2H1	Reverse transcriptase Ty1/copia-type domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.539
M1A5B6_SOLTU	M1C8D2_SOLTU	M1A5B6	M1C8D2	Reverse transcriptase Ty1/copia-type domain-containing protein.	Gag_pre-integrs domain-containing protein.	0.526
M1A5B6_SOLTU	M1DK54_SOLTU	M1A5B6	M1DK54	Reverse transcriptase Ty1/copia-type domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.536
M1A5B6_SOLTU	M1DKM4_SOLTU	M1A5B6	M1DKM4	Reverse transcriptase Ty1/copia-type domain-containing protein.	Integrase catalytic domain-containing protein.	0.528
M1AR77_SOLTU	M1A5B6_SOLTU	M1AR77	M1A5B6	Integrase catalytic domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.528
M1AR77_SOLTU	M1BMX3_SOLTU	M1AR77	M1BMX3	Integrase catalytic domain-containing protein.	Gag_pre-integrs domain-containing protein.	0.476
M1AR77_SOLTU	M1BZG8_SOLTU	M1AR77	M1BZG8	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.572
M1AR77_SOLTU	M1C2H1_SOLTU	M1AR77	M1C2H1	Integrase catalytic domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.530
M1AR77_SOLTU	M1C2J2_SOLTU	M1AR77	M1C2J2	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.444
M1AR77_SOLTU	M1C8D2_SOLTU	M1AR77	M1C8D2	Integrase catalytic domain-containing protein.	Gag_pre-integrs domain-containing protein.	0.535
M1AR77_SOLTU	M1CU18_SOLTU	M1AR77	M1CU18	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.559
M1AR77_SOLTU	M1CVN7_SOLTU	M1AR77	M1CVN7	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.523
M1AR77_SOLTU	M1DK54_SOLTU	M1AR77	M1DK54	Integrase catalytic domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.528
M1AR77_SOLTU	M1DKM4_SOLTU	M1AR77	M1DKM4	Integrase catalytic domain-containing protein.	Integrase catalytic domain-containing protein.	0.529
M1BMX3_SOLTU	M1A5B6_SOLTU	M1BMX3	M1A5B6	Gag_pre-integrs domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.402
M1BMX3_SOLTU	M1AR77_SOLTU	M1BMX3	M1AR77	Gag_pre-integrs domain-containing protein.	Integrase catalytic domain-containing protein.	0.476
M1BMX3_SOLTU	M1BZG8_SOLTU	M1BMX3	M1BZG8	Gag_pre-integrs domain-containing protein.	Uncharacterized protein.	0.426
M1BMX3_SOLTU	M1C2J2_SOLTU	M1BMX3	M1C2J2	Gag_pre-integrs domain-containing protein.	Uncharacterized protein.	0.492