40 items (Solanum tuberosum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M1B992_SOLTU	Uncharacterized protein. (495 aa)
	M0ZIW6_SOLTU	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (497 aa)
	M0ZMS9_SOLTU	Uncharacterized protein. (272 aa)
	M0ZSI1_SOLTU	Importin subunit alpha; Belongs to the importin alpha family. (534 aa)
	M0ZZE3_SOLTU	Uncharacterized protein. (272 aa)
	M1A101_SOLTU	Uncharacterized protein. (248 aa)
	M1AB59_SOLTU	Importin subunit alpha; Belongs to the importin alpha family. (527 aa)
	M1AGT6_SOLTU	WD_REPEATS_REGION domain-containing protein. (316 aa)
	M1AI07_SOLTU	WD_REPEATS_REGION domain-containing protein. (316 aa)
	M1AJG9_SOLTU	FeS_assembly_P domain-containing protein. (158 aa)
	M1AP87_SOLTU	Importin subunit alpha; Belongs to the importin alpha family. (520 aa)
	M1ASF1_SOLTU	TPR_REGION domain-containing protein. (744 aa)
	M1AV27_SOLTU	Uncharacterized protein. (248 aa)
	M1B7C9_SOLTU	Importin subunit alpha; Belongs to the importin alpha family. (529 aa)
	M1DXP9_SOLTU	Uncharacterized protein. (142 aa)
	M1D4Q9_SOLTU	Uncharacterized protein. (237 aa)
	M1D3E4_SOLTU	Uncharacterized protein. (215 aa)
	M1CXI3_SOLTU	Importin subunit alpha; Belongs to the importin alpha family. (529 aa)
	M1CXD2_SOLTU	Uncharacterized protein. (89 aa)
	M1CSH6_SOLTU	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (499 aa)
	M1CRP4_SOLTU	ER lumen protein-retaining receptor. (215 aa)
	M1CRG7_SOLTU	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family. (475 aa)
	M1CPC5_SOLTU	Uncharacterized protein. (274 aa)
	M1CMI6_SOLTU	Uncharacterized protein. (538 aa)
	M1CJ58_SOLTU	Importin N-terminal domain-containing protein. (873 aa)
	M1C8H9_SOLTU	ANK_REP_REGION domain-containing protein. (348 aa)
	M1C818_SOLTU	Uncharacterized protein. (184 aa)
	M1C710_SOLTU	Importin N-terminal domain-containing protein. (1049 aa)
	M1C6Z9_SOLTU	ANK_REP_REGION domain-containing protein. (351 aa)
	M1C133_SOLTU	Uncharacterized protein. (204 aa)
	M1BZR1_SOLTU	Uncharacterized protein. (190 aa)
	M1BWU4_SOLTU	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family. (475 aa)
	M1BUK2_SOLTU	Uncharacterized protein. (290 aa)
	M1BSJ5_SOLTU	Uncharacterized protein. (274 aa)
	M1BSJ4_SOLTU	Uncharacterized protein. (275 aa)
	M1BSA3_SOLTU	Uncharacterized protein. (70 aa)
	M1BQG7_SOLTU	Uncharacterized protein. (169 aa)
	M1BQ94_SOLTU	Importin N-terminal domain-containing protein. (868 aa)
	M1BL76_SOLTU	Importin N-terminal domain-containing protein. (871 aa)
	M1BCD5_SOLTU	Uncharacterized protein. (125 aa)

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M0ZIW6_SOLTU	M1B992_SOLTU	M0ZIW6	M1B992	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Uncharacterized protein.	0.983
M0ZIW6_SOLTU	M1BCD5_SOLTU	M0ZIW6	M1BCD5	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Uncharacterized protein.	0.983
M0ZIW6_SOLTU	M1BWU4_SOLTU	M0ZIW6	M1BWU4	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.673
M0ZIW6_SOLTU	M1CMI6_SOLTU	M0ZIW6	M1CMI6	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Uncharacterized protein.	0.737
M0ZIW6_SOLTU	M1CRG7_SOLTU	M0ZIW6	M1CRG7	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.	0.673
M0ZIW6_SOLTU	M1CSH6_SOLTU	M0ZIW6	M1CSH6	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	0.900
M0ZSI1_SOLTU	M1BL76_SOLTU	M0ZSI1	M1BL76	Importin subunit alpha; Belongs to the importin alpha family.	Importin N-terminal domain-containing protein.	0.825
M0ZSI1_SOLTU	M1BQ94_SOLTU	M0ZSI1	M1BQ94	Importin subunit alpha; Belongs to the importin alpha family.	Importin N-terminal domain-containing protein.	0.825
M0ZSI1_SOLTU	M1CJ58_SOLTU	M0ZSI1	M1CJ58	Importin subunit alpha; Belongs to the importin alpha family.	Importin N-terminal domain-containing protein.	0.812
M1A101_SOLTU	M1ASF1_SOLTU	M1A101	M1ASF1	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.481
M1A101_SOLTU	M1AV27_SOLTU	M1A101	M1AV27	Uncharacterized protein.	Uncharacterized protein.	0.900
M1AB59_SOLTU	M1BL76_SOLTU	M1AB59	M1BL76	Importin subunit alpha; Belongs to the importin alpha family.	Importin N-terminal domain-containing protein.	0.825
M1AB59_SOLTU	M1BQ94_SOLTU	M1AB59	M1BQ94	Importin subunit alpha; Belongs to the importin alpha family.	Importin N-terminal domain-containing protein.	0.825
M1AB59_SOLTU	M1CJ58_SOLTU	M1AB59	M1CJ58	Importin subunit alpha; Belongs to the importin alpha family.	Importin N-terminal domain-containing protein.	0.812
M1AGT6_SOLTU	M1AI07_SOLTU	M1AGT6	M1AI07	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.900
M1AGT6_SOLTU	M1ASF1_SOLTU	M1AGT6	M1ASF1	WD_REPEATS_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.997
M1AI07_SOLTU	M1AGT6_SOLTU	M1AI07	M1AGT6	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.900
M1AI07_SOLTU	M1ASF1_SOLTU	M1AI07	M1ASF1	WD_REPEATS_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.997
M1AP87_SOLTU	M1BL76_SOLTU	M1AP87	M1BL76	Importin subunit alpha; Belongs to the importin alpha family.	Importin N-terminal domain-containing protein.	0.845
M1AP87_SOLTU	M1BQ94_SOLTU	M1AP87	M1BQ94	Importin subunit alpha; Belongs to the importin alpha family.	Importin N-terminal domain-containing protein.	0.845