(49 nodes) Heterochromatin assembly network (Solanum tuberosum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M1BEV3_SOLTU	Uncharacterized protein. (919 aa)
	M0ZMM5_SOLTU	Uncharacterized protein. (696 aa)
	M0ZNQ7_SOLTU	Uncharacterized protein. (892 aa)
	M0ZNT0_SOLTU	Uncharacterized protein. (995 aa)
	M0ZNT1_SOLTU	Uncharacterized protein. (916 aa)
	M0ZRF4_SOLTU	SAWADEE domain-containing protein. (307 aa)
	M0ZSI0_SOLTU	Uncharacterized protein. (326 aa)
	M0ZXQ3_SOLTU	Uncharacterized protein. (819 aa)
	M0ZZA0_SOLTU	Uncharacterized protein. (627 aa)
	M1A8T4_SOLTU	Uncharacterized protein. (623 aa)
	M1A8T6_SOLTU	Uncharacterized protein. (1205 aa)
	M1AI70_SOLTU	Uncharacterized protein. (829 aa)
	M1AIM4_SOLTU	Uncharacterized protein. (73 aa)
	M1AY47_SOLTU	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family. (275 aa)
	M1AYY1_SOLTU	Helicase C-terminal domain-containing protein. (145 aa)
	M1B487_SOLTU	Uncharacterized protein. (198 aa)
	M1B489_SOLTU	Uncharacterized protein. (635 aa)
	M1B5D9_SOLTU	Helicase ATP-binding domain-containing protein. (672 aa)
	M1B733_SOLTU	Uncharacterized protein. (476 aa)
	M1B734_SOLTU	Uncharacterized protein. (760 aa)
	M1B7D3_SOLTU	Uncharacterized protein. (1106 aa)
	M1B953_SOLTU	Uncharacterized protein. (754 aa)
	M1BK86_SOLTU	Uncharacterized protein. (1019 aa)
	M1BPK9_SOLTU	Uncharacterized protein. (1138 aa)
	M1BVM8_SOLTU	HRDC domain-containing protein. (857 aa)
	M1BZW0_SOLTU	Uncharacterized protein. (1217 aa)
	M1C3T9_SOLTU	Uncharacterized protein. (60 aa)
	M1C4D9_SOLTU	SWIM-type domain-containing protein. (92 aa)
	M1C7N3_SOLTU	Uncharacterized protein. (1286 aa)
	M1C9D8_SOLTU	Uncharacterized protein. (638 aa)
	M1CFH0_SOLTU	Matrin-type domain-containing protein. (262 aa)
	M1CHV0_SOLTU	CBFD_NFYB_HMF domain-containing protein. (172 aa)
	M1CPN7_SOLTU	XH domain-containing protein. (136 aa)
	M1CSP7_SOLTU	WD_REPEATS_REGION domain-containing protein. (453 aa)
	M1CUR7_SOLTU	Uncharacterized protein. (660 aa)
	M1CZ45_SOLTU	Uncharacterized protein. (760 aa)
	M1D1X3_SOLTU	Uncharacterized protein. (925 aa)
	M1D2M5_SOLTU	Chromo domain-containing protein. (463 aa)
	M1D452_SOLTU	Chromo domain-containing protein. (491 aa)
	M1D702_SOLTU	Uncharacterized protein. (465 aa)
	M1D7T4_SOLTU	Uncharacterized protein. (922 aa)
	M1DAM3_SOLTU	SNF2_N domain-containing protein. (235 aa)
	M1DAR5_SOLTU	SNF2_N domain-containing protein. (168 aa)
	M1DGU3_SOLTU	Uncharacterized protein. (189 aa)
	M1DLN5_SOLTU	SNF2_N domain-containing protein. (245 aa)
	M1DP89_SOLTU	Uncharacterized protein. (386 aa)
	M1DU36_SOLTU	SPOC domain-containing protein. (258 aa)
	M1DX39_SOLTU	FBD domain-containing protein. (370 aa)
	M1DY63_SOLTU	Helicase C-terminal domain-containing protein. (125 aa)

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M0ZMM5_SOLTU	M0ZRF4_SOLTU	M0ZMM5	M0ZRF4	Uncharacterized protein.	SAWADEE domain-containing protein.	0.457
M0ZMM5_SOLTU	M1AY47_SOLTU	M0ZMM5	M1AY47	Uncharacterized protein.	Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.	0.475
M0ZMM5_SOLTU	M1BPK9_SOLTU	M0ZMM5	M1BPK9	Uncharacterized protein.	Uncharacterized protein.	0.402
M0ZMM5_SOLTU	M1D1X3_SOLTU	M0ZMM5	M1D1X3	Uncharacterized protein.	Uncharacterized protein.	0.427
M0ZNQ7_SOLTU	M1CHV0_SOLTU	M0ZNQ7	M1CHV0	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.437
M0ZNT0_SOLTU	M1CHV0_SOLTU	M0ZNT0	M1CHV0	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.437
M0ZNT1_SOLTU	M1CHV0_SOLTU	M0ZNT1	M1CHV0	Uncharacterized protein.	CBFD_NFYB_HMF domain-containing protein.	0.437
M0ZRF4_SOLTU	M0ZMM5_SOLTU	M0ZRF4	M0ZMM5	SAWADEE domain-containing protein.	Uncharacterized protein.	0.457
M0ZRF4_SOLTU	M0ZSI0_SOLTU	M0ZRF4	M0ZSI0	SAWADEE domain-containing protein.	Uncharacterized protein.	0.426
M0ZRF4_SOLTU	M1AIM4_SOLTU	M0ZRF4	M1AIM4	SAWADEE domain-containing protein.	Uncharacterized protein.	0.547
M0ZRF4_SOLTU	M1C7N3_SOLTU	M0ZRF4	M1C7N3	SAWADEE domain-containing protein.	Uncharacterized protein.	0.512
M0ZRF4_SOLTU	M1CUR7_SOLTU	M0ZRF4	M1CUR7	SAWADEE domain-containing protein.	Uncharacterized protein.	0.457
M0ZRF4_SOLTU	M1D1X3_SOLTU	M0ZRF4	M1D1X3	SAWADEE domain-containing protein.	Uncharacterized protein.	0.425
M0ZSI0_SOLTU	M0ZRF4_SOLTU	M0ZSI0	M0ZRF4	Uncharacterized protein.	SAWADEE domain-containing protein.	0.426
M0ZXQ3_SOLTU	M1B733_SOLTU	M0ZXQ3	M1B733	Uncharacterized protein.	Uncharacterized protein.	0.432
M0ZXQ3_SOLTU	M1B734_SOLTU	M0ZXQ3	M1B734	Uncharacterized protein.	Uncharacterized protein.	0.432
M0ZXQ3_SOLTU	M1B953_SOLTU	M0ZXQ3	M1B953	Uncharacterized protein.	Uncharacterized protein.	0.432
M0ZXQ3_SOLTU	M1D2M5_SOLTU	M0ZXQ3	M1D2M5	Uncharacterized protein.	Chromo domain-containing protein.	0.411
M0ZXQ3_SOLTU	M1D452_SOLTU	M0ZXQ3	M1D452	Uncharacterized protein.	Chromo domain-containing protein.	0.411
M0ZZA0_SOLTU	M1BVM8_SOLTU	M0ZZA0	M1BVM8	Uncharacterized protein.	HRDC domain-containing protein.	0.426