(12 nodes) Mitochondrial cytochrome c oxidase assembly network (Solanum tuberosum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M0ZK21_SOLTU	Uncharacterized protein. (86 aa)
	M0ZK22_SOLTU	Uncharacterized protein. (184 aa)
	M0ZZG6_SOLTU	Thioredoxin domain-containing protein. (336 aa)
	M1A6B8_SOLTU	Uncharacterized protein. (92 aa)
	M1ASW0_SOLTU	HIG1 domain-containing protein. (97 aa)
	M1B3M8_SOLTU	Uncharacterized protein. (86 aa)
	M1B448_SOLTU	Uncharacterized protein. (71 aa)
	M1BJ42_SOLTU	Uncharacterized protein. (127 aa)
	M1BUG0_SOLTU	Uncharacterized protein. (298 aa)
	M1C8J3_SOLTU	COX assembly mitochondrial protein. (96 aa)
	M1CAU5_SOLTU	HIG1 domain-containing protein. (100 aa)
	M1CCE1_SOLTU	Uncharacterized protein. (145 aa)

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M0ZZG6_SOLTU	M1B448_SOLTU	M0ZZG6	M1B448	Thioredoxin domain-containing protein.	Uncharacterized protein.	0.522
M0ZZG6_SOLTU	M1CCE1_SOLTU	M0ZZG6	M1CCE1	Thioredoxin domain-containing protein.	Uncharacterized protein.	0.566
M1B448_SOLTU	M0ZZG6_SOLTU	M1B448	M0ZZG6	Uncharacterized protein.	Thioredoxin domain-containing protein.	0.522
M1B448_SOLTU	M1BUG0_SOLTU	M1B448	M1BUG0	Uncharacterized protein.	Uncharacterized protein.	0.557
M1B448_SOLTU	M1C8J3_SOLTU	M1B448	M1C8J3	Uncharacterized protein.	COX assembly mitochondrial protein.	0.665
M1B448_SOLTU	M1CCE1_SOLTU	M1B448	M1CCE1	Uncharacterized protein.	Uncharacterized protein.	0.689
M1BUG0_SOLTU	M1B448_SOLTU	M1BUG0	M1B448	Uncharacterized protein.	Uncharacterized protein.	0.557
M1BUG0_SOLTU	M1CCE1_SOLTU	M1BUG0	M1CCE1	Uncharacterized protein.	Uncharacterized protein.	0.566
M1C8J3_SOLTU	M1B448_SOLTU	M1C8J3	M1B448	COX assembly mitochondrial protein.	Uncharacterized protein.	0.665
M1C8J3_SOLTU	M1CCE1_SOLTU	M1C8J3	M1CCE1	COX assembly mitochondrial protein.	Uncharacterized protein.	0.599
M1CCE1_SOLTU	M0ZZG6_SOLTU	M1CCE1	M0ZZG6	Uncharacterized protein.	Thioredoxin domain-containing protein.	0.566
M1CCE1_SOLTU	M1B448_SOLTU	M1CCE1	M1B448	Uncharacterized protein.	Uncharacterized protein.	0.689
M1CCE1_SOLTU	M1BUG0_SOLTU	M1CCE1	M1BUG0	Uncharacterized protein.	Uncharacterized protein.	0.566
M1CCE1_SOLTU	M1C8J3_SOLTU	M1CCE1	M1C8J3	Uncharacterized protein.	COX assembly mitochondrial protein.	0.599