(14 nodes) RNA polymerase I complex network (Solanum tuberosum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M1CYD2_SOLTU	Uncharacterized protein. (206 aa)
	M1CX25_SOLTU	RPOLD domain-containing protein. (393 aa)
	M1CLJ4_SOLTU	Uncharacterized protein. (207 aa)
	M1BZS0_SOLTU	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (121 aa)
	M1BT59_SOLTU	Uncharacterized protein. (119 aa)
	M1BSI6_SOLTU	Uncharacterized protein. (73 aa)
	M1BRS4_SOLTU	Uncharacterized protein. (206 aa)
	M1BN56_SOLTU	Uncharacterized protein. (104 aa)
	M1AHN9_SOLTU	Uncharacterized protein. (144 aa)
	M1A270_SOLTU	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family. (145 aa)
	M0ZR13_SOLTU	Uncharacterized protein. (180 aa)
	M0ZNI9_SOLTU	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family. (144 aa)
	M1AFQ3_SOLTU	Uncharacterized protein. (231 aa)
	M1BCD9_SOLTU	Uncharacterized protein. (431 aa)

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M0ZNI9_SOLTU	M0ZR13_SOLTU	M0ZNI9	M0ZR13	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	Uncharacterized protein.	0.983
M0ZNI9_SOLTU	M1A270_SOLTU	M0ZNI9	M1A270	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	0.904
M0ZNI9_SOLTU	M1AFQ3_SOLTU	M0ZNI9	M1AFQ3	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	Uncharacterized protein.	0.986
M0ZNI9_SOLTU	M1AHN9_SOLTU	M0ZNI9	M1AHN9	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	Uncharacterized protein.	0.994
M0ZNI9_SOLTU	M1BCD9_SOLTU	M0ZNI9	M1BCD9	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	Uncharacterized protein.	0.983
M0ZNI9_SOLTU	M1BN56_SOLTU	M0ZNI9	M1BN56	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	Uncharacterized protein.	0.986
M0ZNI9_SOLTU	M1BRS4_SOLTU	M0ZNI9	M1BRS4	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	Uncharacterized protein.	0.974
M0ZNI9_SOLTU	M1BSI6_SOLTU	M0ZNI9	M1BSI6	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	Uncharacterized protein.	0.992
M0ZNI9_SOLTU	M1BZS0_SOLTU	M0ZNI9	M1BZS0	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.994
M0ZNI9_SOLTU	M1CLJ4_SOLTU	M0ZNI9	M1CLJ4	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	Uncharacterized protein.	0.974
M0ZNI9_SOLTU	M1CX25_SOLTU	M0ZNI9	M1CX25	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	RPOLD domain-containing protein.	0.994
M0ZNI9_SOLTU	M1CYD2_SOLTU	M0ZNI9	M1CYD2	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	Uncharacterized protein.	0.974
M0ZR13_SOLTU	M0ZNI9_SOLTU	M0ZR13	M0ZNI9	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	0.983
M0ZR13_SOLTU	M1A270_SOLTU	M0ZR13	M1A270	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	0.983
M0ZR13_SOLTU	M1AFQ3_SOLTU	M0ZR13	M1AFQ3	Uncharacterized protein.	Uncharacterized protein.	0.994
M0ZR13_SOLTU	M1AHN9_SOLTU	M0ZR13	M1AHN9	Uncharacterized protein.	Uncharacterized protein.	0.990
M0ZR13_SOLTU	M1BCD9_SOLTU	M0ZR13	M1BCD9	Uncharacterized protein.	Uncharacterized protein.	0.540
M0ZR13_SOLTU	M1BN56_SOLTU	M0ZR13	M1BN56	Uncharacterized protein.	Uncharacterized protein.	0.994
M0ZR13_SOLTU	M1BRS4_SOLTU	M0ZR13	M1BRS4	Uncharacterized protein.	Uncharacterized protein.	0.964
M0ZR13_SOLTU	M1BSI6_SOLTU	M0ZR13	M1BSI6	Uncharacterized protein.	Uncharacterized protein.	0.989