(5 nodes) Ribosomal protein L2 network (Solanum tuberosum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rpl2-A	50S ribosomal protein L2, chloroplastic; Belongs to the universal ribosomal protein uL2 family. (274 aa)
	M1CCA0_SOLTU	Ribosomal_L2_C domain-containing protein. (260 aa)
	M1BZ12_SOLTU	Ribosomal_L2_C domain-containing protein. (260 aa)
	M1BP14_SOLTU	Ribosomal_L2_C domain-containing protein. (260 aa)
	M1AH18_SOLTU	Ribosomal_L2 domain-containing protein. (229 aa)

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M1BP14_SOLTU	M1BZ12_SOLTU	M1BP14	M1BZ12	Ribosomal_L2_C domain-containing protein.	Ribosomal_L2_C domain-containing protein.	0.900
M1BP14_SOLTU	M1CCA0_SOLTU	M1BP14	M1CCA0	Ribosomal_L2_C domain-containing protein.	Ribosomal_L2_C domain-containing protein.	0.900
M1BZ12_SOLTU	M1BP14_SOLTU	M1BZ12	M1BP14	Ribosomal_L2_C domain-containing protein.	Ribosomal_L2_C domain-containing protein.	0.900
M1BZ12_SOLTU	M1CCA0_SOLTU	M1BZ12	M1CCA0	Ribosomal_L2_C domain-containing protein.	Ribosomal_L2_C domain-containing protein.	0.900
M1CCA0_SOLTU	M1BP14_SOLTU	M1CCA0	M1BP14	Ribosomal_L2_C domain-containing protein.	Ribosomal_L2_C domain-containing protein.	0.900
M1CCA0_SOLTU	M1BZ12_SOLTU	M1CCA0	M1BZ12	Ribosomal_L2_C domain-containing protein.	Ribosomal_L2_C domain-containing protein.	0.900