(116 nodes) Helicase superfamily 1/2, ATP-binding domain network (Solanum tuberosum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M1AGZ4_SOLTU	Uncharacterized protein. (881 aa)
	M0ZG81_SOLTU	Helicase ATP-binding domain-containing protein. (88 aa)
	M0ZGH1_SOLTU	Uncharacterized protein. (1336 aa)
	M0ZH14_SOLTU	Uncharacterized protein. (871 aa)
	M0ZI59_SOLTU	Helicase ATP-binding domain-containing protein. (278 aa)
	M0ZID7_SOLTU	Uncharacterized protein; Belongs to the DEAD box helicase family. (730 aa)
	M0ZKR0_SOLTU	Uncharacterized protein. (618 aa)
	M0ZMC3_SOLTU	Uncharacterized protein; Belongs to the DEAD box helicase family. (797 aa)
	M0ZNF7_SOLTU	Uncharacterized protein. (553 aa)
	M0ZNQ7_SOLTU	Uncharacterized protein. (892 aa)
	M0ZNT0_SOLTU	Uncharacterized protein. (995 aa)
	M0ZNT1_SOLTU	Uncharacterized protein. (916 aa)
	M0ZNU5_SOLTU	Uncharacterized protein. (1199 aa)
	M0ZQC3_SOLTU	Uncharacterized protein. (822 aa)
	M0ZQX2_SOLTU	RNA helicase. (534 aa)
	M0ZQX3_SOLTU	RNA helicase. (597 aa)
	M0ZSS2_SOLTU	Uncharacterized protein. (455 aa)
	M0ZTM6_SOLTU	Uncharacterized protein. (548 aa)
	M0ZUW2_SOLTU	Uncharacterized protein. (548 aa)
	M0ZUW3_SOLTU	Helicase ATP-binding domain-containing protein. (297 aa)
	M0ZYQ5_SOLTU	Uncharacterized protein. (806 aa)
	M0ZYS2_SOLTU	Uncharacterized protein. (602 aa)
	M0ZZY5_SOLTU	Uncharacterized protein. (1115 aa)
	M1A1C3_SOLTU	Uncharacterized protein; Belongs to the DEAD box helicase family. (413 aa)
	M1A330_SOLTU	Uncharacterized protein. (483 aa)
	M1A8T4_SOLTU	Uncharacterized protein. (623 aa)
	M1A8T6_SOLTU	Uncharacterized protein. (1205 aa)
	M1AAT4_SOLTU	Uncharacterized protein. (1285 aa)
	M1ACK8_SOLTU	Uncharacterized protein. (409 aa)
	M1AEQ1_SOLTU	Uncharacterized protein; Belongs to the DEAD box helicase family. (413 aa)
	LOS4	Uncharacterized protein. (514 aa)
	M1AHZ9_SOLTU	Uncharacterized protein. (321 aa)
	M1AI31_SOLTU	Uncharacterized protein; Belongs to the DEAD box helicase family. (774 aa)
	M1AI36_SOLTU	Uncharacterized protein. (723 aa)
	M1AJB8_SOLTU	Uncharacterized protein; Belongs to the DEAD box helicase family. (557 aa)
	M1AJX4_SOLTU	Uncharacterized protein; Belongs to the DEAD box helicase family. (669 aa)
	M1ALL5_SOLTU	Uncharacterized protein; Belongs to the DEAD box helicase family. (745 aa)
	M1ANH6_SOLTU	Uncharacterized protein. (1213 aa)
	M1APQ1_SOLTU	Helicase ATP-binding domain-containing protein. (600 aa)
	M1APR1_SOLTU	Uncharacterized protein. (656 aa)
	M1APR3_SOLTU	Uncharacterized protein. (430 aa)
	M1APR5_SOLTU	Uncharacterized protein. (722 aa)
	M1AS96_SOLTU	Uncharacterized protein. (768 aa)
	M1ASG6_SOLTU	Uncharacterized protein; Belongs to the DEAD box helicase family. (487 aa)
	M1ASJ7_SOLTU	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1914 aa)
	M1AWX3_SOLTU	Uncharacterized protein. (731 aa)
	M1B0P1_SOLTU	Uncharacterized protein. (765 aa)
	M1B1M2_SOLTU	Uncharacterized protein. (1136 aa)
	M1B241_SOLTU	Uncharacterized protein. (666 aa)
	M1B2J7_SOLTU	Uncharacterized protein. (996 aa)
	M1B405_SOLTU	Uncharacterized protein. (589 aa)
	M1B5D9_SOLTU	Helicase ATP-binding domain-containing protein. (672 aa)
	M1B5K5_SOLTU	Helicase ATP-binding domain-containing protein. (160 aa)
	M1B734_SOLTU	Uncharacterized protein. (760 aa)
	M1B766_SOLTU	Uncharacterized protein. (349 aa)
	M1B7D3_SOLTU	Uncharacterized protein. (1106 aa)
	M1B8W9_SOLTU	Uncharacterized protein. (923 aa)
	M1B953_SOLTU	Uncharacterized protein. (754 aa)
	M1BC13_SOLTU	Uncharacterized protein. (1622 aa)
	M1BCF3_SOLTU	Helicase ATP-binding domain-containing protein. (956 aa)
	M1BD85_SOLTU	Helicase ATP-binding domain-containing protein. (922 aa)
	M1BE32_SOLTU	Uncharacterized protein; Belongs to the DEAD box helicase family. (707 aa)
	M1BI12_SOLTU	Q_MOTIF domain-containing protein. (98 aa)
	M1BIR6_SOLTU	Uncharacterized protein. (690 aa)
	M1BJP5_SOLTU	Uncharacterized protein; Belongs to the DEAD box helicase family. (718 aa)
	M1BR46_SOLTU	Uncharacterized protein. (471 aa)
	M1BTK7_SOLTU	Uncharacterized protein. (979 aa)
	M1BTY2_SOLTU	Uncharacterized protein. (428 aa)
	M1BUV6_SOLTU	Uncharacterized protein. (992 aa)
	M1BV48_SOLTU	Uncharacterized protein. (427 aa)
	M1BWK1_SOLTU	Uncharacterized protein. (587 aa)
	M1BXA3_SOLTU	Uncharacterized protein. (854 aa)
	M1BXC5_SOLTU	Uncharacterized protein. (1164 aa)
	M1BY31_SOLTU	Helicase ATP-binding domain-containing protein. (286 aa)
	M1BZT2_SOLTU	Uncharacterized protein. (1141 aa)
	M1C0M4_SOLTU	RNA helicase. (755 aa)
	M1C1C7_SOLTU	RNA helicase. (623 aa)
	M1C2F9_SOLTU	Uncharacterized protein. (1156 aa)
	M1C2K6_SOLTU	Uncharacterized protein. (1064 aa)
	M1C3V3_SOLTU	Uncharacterized protein. (513 aa)
	M1C4K2_SOLTU	Uncharacterized protein. (638 aa)
	M1C6E1_SOLTU	Uncharacterized protein. (1729 aa)
	M1C7M9_SOLTU	DEAD domain-containing protein. (112 aa)
	M1C7N3_SOLTU	Uncharacterized protein. (1286 aa)
	M1CAB9_SOLTU	RNA helicase. (566 aa)
	M1CAK1_SOLTU	Uncharacterized protein. (1050 aa)
	M1CDW0_SOLTU	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (477 aa)
	M1CG93_SOLTU	Helicase ATP-binding domain-containing protein. (371 aa)
	M1CIH0_SOLTU	Uncharacterized protein. (979 aa)
	M1CJL7_SOLTU	Uncharacterized protein. (728 aa)
	M1CM00_SOLTU	DEAD domain-containing protein. (336 aa)
	M1CPF1_SOLTU	Uncharacterized protein. (669 aa)
	M1CRV4_SOLTU	Uncharacterized protein. (589 aa)
	M1CT73_SOLTU	Uncharacterized protein. (498 aa)
	M1CUZ8_SOLTU	Uncharacterized protein; Belongs to the DEAD box helicase family. (410 aa)
	M1CUZ9_SOLTU	Uncharacterized protein; Belongs to the DEAD box helicase family. (413 aa)
	M1CW81_SOLTU	Uncharacterized protein. (726 aa)
	M1CW82_SOLTU	DEAD domain-containing protein. (198 aa)
	M1CZC1_SOLTU	Uncharacterized protein. (2174 aa)
	M1D186_SOLTU	Uncharacterized protein. (1058 aa)
	M1D1X3_SOLTU	Uncharacterized protein. (925 aa)
	M1D269_SOLTU	Uncharacterized protein. (674 aa)
	M1D3R2_SOLTU	Uncharacterized protein; Belongs to the DEAD box helicase family. (613 aa)
	M1D553_SOLTU	Uncharacterized protein. (604 aa)
	M1D588_SOLTU	Uncharacterized protein. (527 aa)
	M1D688_SOLTU	Uncharacterized protein. (888 aa)
	M1D796_SOLTU	Uncharacterized protein; Belongs to the DEAD box helicase family. (501 aa)
	M1D7D0_SOLTU	Uncharacterized protein. (892 aa)
	M1D8C5_SOLTU	Uncharacterized protein. (801 aa)
	M1D978_SOLTU	SNF2_N domain-containing protein. (395 aa)
	M1DAM3_SOLTU	SNF2_N domain-containing protein. (235 aa)
	M1DAR5_SOLTU	SNF2_N domain-containing protein. (168 aa)
	M1DFM6_SOLTU	Uncharacterized protein; Belongs to the DEAD box helicase family. (414 aa)
	M1DHI0_SOLTU	Uncharacterized protein. (653 aa)
	M1DLN5_SOLTU	SNF2_N domain-containing protein. (245 aa)
	M1DUI4_SOLTU	Uncharacterized protein. (514 aa)

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOS4	M1AI36_SOLTU	M1AG92	M1AI36	Uncharacterized protein.	Uncharacterized protein.	0.453
LOS4	M1BI12_SOLTU	M1AG92	M1BI12	Uncharacterized protein.	Q_MOTIF domain-containing protein.	0.559
LOS4	M1C2F9_SOLTU	M1AG92	M1C2F9	Uncharacterized protein.	Uncharacterized protein.	0.419
M0ZGH1_SOLTU	M0ZH14_SOLTU	M0ZGH1	M0ZH14	Uncharacterized protein.	Uncharacterized protein.	0.611
M0ZGH1_SOLTU	M0ZI59_SOLTU	M0ZGH1	M0ZI59	Uncharacterized protein.	Helicase ATP-binding domain-containing protein.	0.430
M0ZGH1_SOLTU	M0ZID7_SOLTU	M0ZGH1	M0ZID7	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.550
M0ZGH1_SOLTU	M0ZMC3_SOLTU	M0ZGH1	M0ZMC3	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.897
M0ZGH1_SOLTU	M0ZNF7_SOLTU	M0ZGH1	M0ZNF7	Uncharacterized protein.	Uncharacterized protein.	0.909
M0ZGH1_SOLTU	M0ZQX2_SOLTU	M0ZGH1	M0ZQX2	Uncharacterized protein.	RNA helicase.	0.855
M0ZGH1_SOLTU	M0ZQX3_SOLTU	M0ZGH1	M0ZQX3	Uncharacterized protein.	RNA helicase.	0.855
M0ZGH1_SOLTU	M0ZYQ5_SOLTU	M0ZGH1	M0ZYQ5	Uncharacterized protein.	Uncharacterized protein.	0.611
M0ZGH1_SOLTU	M1ACK8_SOLTU	M0ZGH1	M1ACK8	Uncharacterized protein.	Uncharacterized protein.	0.612
M0ZGH1_SOLTU	M1AI36_SOLTU	M0ZGH1	M1AI36	Uncharacterized protein.	Uncharacterized protein.	0.813
M0ZGH1_SOLTU	M1AJB8_SOLTU	M0ZGH1	M1AJB8	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.550
M0ZGH1_SOLTU	M1ALL5_SOLTU	M0ZGH1	M1ALL5	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.896
M0ZGH1_SOLTU	M1AS96_SOLTU	M0ZGH1	M1AS96	Uncharacterized protein.	Uncharacterized protein.	0.771
M0ZGH1_SOLTU	M1ASG6_SOLTU	M0ZGH1	M1ASG6	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.951
M0ZGH1_SOLTU	M1B0P1_SOLTU	M0ZGH1	M1B0P1	Uncharacterized protein.	Uncharacterized protein.	0.541
M0ZGH1_SOLTU	M1B2J7_SOLTU	M0ZGH1	M1B2J7	Uncharacterized protein.	Uncharacterized protein.	0.902
M0ZGH1_SOLTU	M1B766_SOLTU	M0ZGH1	M1B766	Uncharacterized protein.	Uncharacterized protein.	0.809