28 items (Solanum tuberosum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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co-expression

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Your Input:
	M1BB88_SOLTU	Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family. (426 aa)
	M0ZNR5_SOLTU	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-. (877 aa)
	M0ZRE1_SOLTU	RECA_2 domain-containing protein. (588 aa)
	M0ZTG0_SOLTU	Tr-type G domain-containing protein. (1023 aa)
	M0ZY89_SOLTU	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (147 aa)
	M1A0N5_SOLTU	Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (787 aa)
	M1A283_SOLTU	Ribosomal_S5_C domain-containing protein. (108 aa)
	M1A903_SOLTU	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1487 aa)
	M1AJG6_SOLTU	Uncharacterized protein. (509 aa)
	M1AV75_SOLTU	Uncharacterized protein. (205 aa)
	M1AV78_SOLTU	Uncharacterized protein. (151 aa)
	M1B681_SOLTU	Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family. (1228 aa)
	M1BC62_SOLTU	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (502 aa)
	M1BEQ3_SOLTU	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (210 aa)
	M1BFJ3_SOLTU	Uncharacterized protein. (500 aa)
	M1C2P2_SOLTU	GHMP_kinases_N domain-containing protein. (408 aa)
	M1C6M4_SOLTU	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (386 aa)
	M1C7S0_SOLTU	Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family. (421 aa)
	M1CBF6_SOLTU	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (280 aa)
	M1CBV6_SOLTU	DNA_mis_repair domain-containing protein. (187 aa)
	M1CDF4_SOLTU	Uncharacterized protein. (376 aa)
	M1CGG0_SOLTU	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (760 aa)
	M1CSA7_SOLTU	Mevalonate kinase. (395 aa)
	M1CWN2_SOLTU	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (305 aa)
	M1CXJ6_SOLTU	Topo-VIb_trans domain-containing protein. (306 aa)
	M1CY42_SOLTU	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (147 aa)
	M1D118_SOLTU	Tr-type G domain-containing protein. (987 aa)
	M1D1B2_SOLTU	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (259 aa)

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M0ZRE1_SOLTU	M1CGG0_SOLTU	M0ZRE1	M1CGG0	RECA_2 domain-containing protein.	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	0.406
M0ZTG0_SOLTU	M0ZY89_SOLTU	M0ZTG0	M0ZY89	Tr-type G domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.840
M0ZTG0_SOLTU	M1A283_SOLTU	M0ZTG0	M1A283	Tr-type G domain-containing protein.	Ribosomal_S5_C domain-containing protein.	0.859
M0ZTG0_SOLTU	M1A903_SOLTU	M0ZTG0	M1A903	Tr-type G domain-containing protein.	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	0.448
M0ZTG0_SOLTU	M1BC62_SOLTU	M0ZTG0	M1BC62	Tr-type G domain-containing protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.859
M0ZTG0_SOLTU	M1BEQ3_SOLTU	M0ZTG0	M1BEQ3	Tr-type G domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.950
M0ZTG0_SOLTU	M1C6M4_SOLTU	M0ZTG0	M1C6M4	Tr-type G domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.950
M0ZTG0_SOLTU	M1CBF6_SOLTU	M0ZTG0	M1CBF6	Tr-type G domain-containing protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.859
M0ZTG0_SOLTU	M1CWN2_SOLTU	M0ZTG0	M1CWN2	Tr-type G domain-containing protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.859
M0ZTG0_SOLTU	M1CY42_SOLTU	M0ZTG0	M1CY42	Tr-type G domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.840
M0ZTG0_SOLTU	M1D1B2_SOLTU	M0ZTG0	M1D1B2	Tr-type G domain-containing protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.859
M0ZY89_SOLTU	M0ZTG0_SOLTU	M0ZY89	M0ZTG0	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Tr-type G domain-containing protein.	0.840
M0ZY89_SOLTU	M1A0N5_SOLTU	M0ZY89	M1A0N5	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Elongation factor G, chloroplastic; Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl- tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	0.840
M0ZY89_SOLTU	M1A283_SOLTU	M0ZY89	M1A283	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Ribosomal_S5_C domain-containing protein.	0.974
M0ZY89_SOLTU	M1BC62_SOLTU	M0ZY89	M1BC62	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.864
M0ZY89_SOLTU	M1BEQ3_SOLTU	M0ZY89	M1BEQ3	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.907
M0ZY89_SOLTU	M1C6M4_SOLTU	M0ZY89	M1C6M4	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.907
M0ZY89_SOLTU	M1CBF6_SOLTU	M0ZY89	M1CBF6	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.987
M0ZY89_SOLTU	M1CGG0_SOLTU	M0ZY89	M1CGG0	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.	0.840
M0ZY89_SOLTU	M1CWN2_SOLTU	M0ZY89	M1CWN2	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.974