11 items (Solanum tuberosum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M1ANG9_SOLTU	Integrase catalytic domain-containing protein. (893 aa)
	M1AZF9_SOLTU	Reverse transcriptase Ty1/copia-type domain-containing protein. (156 aa)
	M1B084_SOLTU	Reverse transcriptase Ty1/copia-type domain-containing protein. (123 aa)
	M1C2H1_SOLTU	Reverse transcriptase Ty1/copia-type domain-containing protein. (220 aa)
	M1C4J6_SOLTU	Reverse transcriptase Ty1/copia-type domain-containing protein. (608 aa)
	M1C4P9_SOLTU	Reverse transcriptase Ty1/copia-type domain-containing protein. (367 aa)
	M1CTZ7_SOLTU	Integrase catalytic domain-containing protein. (929 aa)
	M1CY31_SOLTU	Reverse transcriptase Ty1/copia-type domain-containing protein. (328 aa)
	M1DD39_SOLTU	Reverse transcriptase Ty1/copia-type domain-containing protein. (646 aa)
	M1DK54_SOLTU	Reverse transcriptase Ty1/copia-type domain-containing protein. (458 aa)
	M1A5B6_SOLTU	Reverse transcriptase Ty1/copia-type domain-containing protein. (352 aa)

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
M1A5B6_SOLTU	M1AZF9_SOLTU	M1A5B6	M1AZF9	Reverse transcriptase Ty1/copia-type domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.536
M1A5B6_SOLTU	M1C2H1_SOLTU	M1A5B6	M1C2H1	Reverse transcriptase Ty1/copia-type domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.539
M1A5B6_SOLTU	M1CTZ7_SOLTU	M1A5B6	M1CTZ7	Reverse transcriptase Ty1/copia-type domain-containing protein.	Integrase catalytic domain-containing protein.	0.531
M1A5B6_SOLTU	M1DK54_SOLTU	M1A5B6	M1DK54	Reverse transcriptase Ty1/copia-type domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.536
M1AZF9_SOLTU	M1A5B6_SOLTU	M1AZF9	M1A5B6	Reverse transcriptase Ty1/copia-type domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.536
M1AZF9_SOLTU	M1B084_SOLTU	M1AZF9	M1B084	Reverse transcriptase Ty1/copia-type domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.502
M1AZF9_SOLTU	M1DK54_SOLTU	M1AZF9	M1DK54	Reverse transcriptase Ty1/copia-type domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.535
M1B084_SOLTU	M1AZF9_SOLTU	M1B084	M1AZF9	Reverse transcriptase Ty1/copia-type domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.502
M1B084_SOLTU	M1C2H1_SOLTU	M1B084	M1C2H1	Reverse transcriptase Ty1/copia-type domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.505
M1B084_SOLTU	M1CTZ7_SOLTU	M1B084	M1CTZ7	Reverse transcriptase Ty1/copia-type domain-containing protein.	Integrase catalytic domain-containing protein.	0.472
M1B084_SOLTU	M1DK54_SOLTU	M1B084	M1DK54	Reverse transcriptase Ty1/copia-type domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.488
M1C2H1_SOLTU	M1A5B6_SOLTU	M1C2H1	M1A5B6	Reverse transcriptase Ty1/copia-type domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.539
M1C2H1_SOLTU	M1B084_SOLTU	M1C2H1	M1B084	Reverse transcriptase Ty1/copia-type domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.505
M1CTZ7_SOLTU	M1A5B6_SOLTU	M1CTZ7	M1A5B6	Integrase catalytic domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.531
M1CTZ7_SOLTU	M1B084_SOLTU	M1CTZ7	M1B084	Integrase catalytic domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.472
M1CTZ7_SOLTU	M1DK54_SOLTU	M1CTZ7	M1DK54	Integrase catalytic domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.526
M1DK54_SOLTU	M1A5B6_SOLTU	M1DK54	M1A5B6	Reverse transcriptase Ty1/copia-type domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.536
M1DK54_SOLTU	M1AZF9_SOLTU	M1DK54	M1AZF9	Reverse transcriptase Ty1/copia-type domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.535
M1DK54_SOLTU	M1B084_SOLTU	M1DK54	M1B084	Reverse transcriptase Ty1/copia-type domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.488
M1DK54_SOLTU	M1CTZ7_SOLTU	M1DK54	M1CTZ7	Reverse transcriptase Ty1/copia-type domain-containing protein.	Integrase catalytic domain-containing protein.	0.526