33 items (Solanum tuberosum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M1D0K6_SOLTU	Phosphotransferase. (491 aa)
	Pain-1	Vacuolar invertase; Belongs to the glycosyl hydrolase 32 family. (639 aa)
	K7WU45_SOLTU	Fructokinase 3; Belongs to the carbohydrate kinase PfkB family. (389 aa)
	M0ZHB7_SOLTU	Phosphotransferase. (499 aa)
	M0ZRR7_SOLTU	Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family. (571 aa)
	CKX4	FAD-binding PCMH-type domain-containing protein. (526 aa)
	M1A0X1_SOLTU	Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family. (653 aa)
	CKX3	FAD-binding PCMH-type domain-containing protein. (533 aa)
	M1AFF4_SOLTU	Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family. (512 aa)
	InvGF	Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family. (512 aa)
	InvGE	Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family. (513 aa)
	M1ANF3_SOLTU	PfkB domain-containing protein; Belongs to the carbohydrate kinase PfkB family. (385 aa)
	M1ARH9_SOLTU	Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family. (575 aa)
	M1B0G1_SOLTU	Phosphotransferase. (512 aa)
	LFY	Floricaula/leafy-like transcription factor; Probable transcription factor. Belongs to the FLO/LFY family. (126 aa)
	GAI	GRAS domain-containing protein; Belongs to the GRAS family. (588 aa)
	M1BNS1_SOLTU	GRAS domain-containing protein; Belongs to the GRAS family. (510 aa)
	FTSZ1	Uncharacterized protein. (419 aa)
	M1C8V2_SOLTU	PfkB domain-containing protein; Belongs to the carbohydrate kinase PfkB family. (347 aa)
	InvCD111	Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family. (536 aa)
	InvCD141	Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family. (582 aa)
	CKX5	FAD-binding PCMH-type domain-containing protein. (517 aa)
	M1D6S7_SOLTU	Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family. (507 aa)
	LOX1.7	Probable linoleate 9S-lipoxygenase 7; Plant lipoxygenases may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure. (861 aa)
	HXK1	Hexokinase-1; Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from plastids to cytosol. Seems neither to be involved in cell sugar sensing nor in carbohydrate metabolism in tuber. (498 aa)
	SBE1	1,4-alpha-glucan-branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in starch by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position. (861 aa)
	SCRK_SOLTU	Fructokinase; May play an important role in maintaining the flux of carbon towards starch formation; Belongs to the carbohydrate kinase PfkB family. (319 aa)
	LOX1.1	Linoleate 9S-lipoxygenase 1; Plant lipoxygenases may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. Catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure. (861 aa)
	AGPS1	Glucose-1-phosphate adenylyltransferase large subunit 1; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (470 aa)
	WAXY	Granule-bound starch synthase 1, chloroplastic/amyloplastic. (607 aa)
	Q307Z3_SOLTU	Fructokinase-like; Belongs to the carbohydrate kinase PfkB family. (329 aa)
	SS3	Soluble starch synthase 3, chloroplastic/amyloplastic; May account for most of the soluble starch synthase activity in the tubers. Contributes only a tiny percentage of the granule-bound activity, but may also contribute to the deposition of transient starch in chloroplasts of leaves; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily. (1230 aa)
	HXK2	Hexokinase-2; Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from plastids to cytosol. Seems neither to be involved in cell sugar sensing nor in carbohydrate metabolism in tuber. (496 aa)

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AGPS1	HXK1	Q00081	O64390	Glucose-1-phosphate adenylyltransferase large subunit 1; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.	Hexokinase-1; Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from plastids to cytosol. Seems neither to be involved in cell sugar sensing nor in carbohydrate metabolism in tuber.	0.677
AGPS1	HXK2	Q00081	Q9SQ76	Glucose-1-phosphate adenylyltransferase large subunit 1; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.	Hexokinase-2; Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from plastids to cytosol. Seems neither to be involved in cell sugar sensing nor in carbohydrate metabolism in tuber.	0.677
AGPS1	InvCD111	Q00081	M1CQM7	Glucose-1-phosphate adenylyltransferase large subunit 1; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.	Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.	0.673
AGPS1	InvGE	Q00081	M1AHR9	Glucose-1-phosphate adenylyltransferase large subunit 1; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.	Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.	0.410
AGPS1	InvGF	Q00081	M1AHR8	Glucose-1-phosphate adenylyltransferase large subunit 1; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.	Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.	0.673
AGPS1	K7WU45_SOLTU	Q00081	K7WU45	Glucose-1-phosphate adenylyltransferase large subunit 1; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.	Fructokinase 3; Belongs to the carbohydrate kinase PfkB family.	0.697
AGPS1	M0ZHB7_SOLTU	Q00081	M0ZHB7	Glucose-1-phosphate adenylyltransferase large subunit 1; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.	Phosphotransferase.	0.677
AGPS1	M1ANF3_SOLTU	Q00081	M1ANF3	Glucose-1-phosphate adenylyltransferase large subunit 1; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.	PfkB domain-containing protein; Belongs to the carbohydrate kinase PfkB family.	0.585
AGPS1	M1B0G1_SOLTU	Q00081	M1B0G1	Glucose-1-phosphate adenylyltransferase large subunit 1; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.	Phosphotransferase.	0.677
AGPS1	M1C8V2_SOLTU	Q00081	M1C8V2	Glucose-1-phosphate adenylyltransferase large subunit 1; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.	PfkB domain-containing protein; Belongs to the carbohydrate kinase PfkB family.	0.585
AGPS1	M1D0K6_SOLTU	Q00081	M1D0K6	Glucose-1-phosphate adenylyltransferase large subunit 1; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.	Phosphotransferase.	0.677
AGPS1	Pain-1	Q00081	E1AXT4	Glucose-1-phosphate adenylyltransferase large subunit 1; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.	Vacuolar invertase; Belongs to the glycosyl hydrolase 32 family.	0.670
AGPS1	Q307Z3_SOLTU	Q00081	Q307Z3	Glucose-1-phosphate adenylyltransferase large subunit 1; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.	Fructokinase-like; Belongs to the carbohydrate kinase PfkB family.	0.585
AGPS1	SBE1	Q00081	P30924	Glucose-1-phosphate adenylyltransferase large subunit 1; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.	1,4-alpha-glucan-branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in starch by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.	0.728
AGPS1	SCRK_SOLTU	Q00081	P37829	Glucose-1-phosphate adenylyltransferase large subunit 1; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.	Fructokinase; May play an important role in maintaining the flux of carbon towards starch formation; Belongs to the carbohydrate kinase PfkB family.	0.585
AGPS1	SS3	Q00081	Q43846	Glucose-1-phosphate adenylyltransferase large subunit 1; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.	Soluble starch synthase 3, chloroplastic/amyloplastic; May account for most of the soluble starch synthase activity in the tubers. Contributes only a tiny percentage of the granule-bound activity, but may also contribute to the deposition of transient starch in chloroplasts of leaves; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.	0.958
AGPS1	WAXY	Q00081	Q00775	Glucose-1-phosphate adenylyltransferase large subunit 1; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.	Granule-bound starch synthase 1, chloroplastic/amyloplastic.	0.982
GAI	LFY	M1BA42	M1B460	GRAS domain-containing protein; Belongs to the GRAS family.	Floricaula/leafy-like transcription factor; Probable transcription factor. Belongs to the FLO/LFY family.	0.671
GAI	M1BNS1_SOLTU	M1BA42	M1BNS1	GRAS domain-containing protein; Belongs to the GRAS family.	GRAS domain-containing protein; Belongs to the GRAS family.	0.900
HXK1	AGPS1	O64390	Q00081	Hexokinase-1; Fructose and glucose phosphorylating enzyme. May be involved in the phosphorylation of glucose during the export from plastids to cytosol. Seems neither to be involved in cell sugar sensing nor in carbohydrate metabolism in tuber.	Glucose-1-phosphate adenylyltransferase large subunit 1; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.	0.677