(17 nodes) (2021) Growth Enhancement of Arabidopsis (Arabidopsis thaliana) and Onion (Allium cepa) With Inoculation of Three Newly Identified Mineral-Solubilizing Fungi in the Genus Aspergillus Section Nigri. network (Solanum tuberosum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	M1D715_SOLTU	Uncharacterized protein. (147 aa)
	Actin-42	Uncharacterized protein. (378 aa)
	M0ZL26_SOLTU	Uncharacterized protein. (159 aa)
	M0ZLI7_SOLTU	Uncharacterized protein. (187 aa)
	Actin	Uncharacterized protein. (377 aa)
	M1A3S2_SOLTU	Uncharacterized protein; Belongs to the calmodulin family. (122 aa)
	Actin-46	Uncharacterized protein. (377 aa)
	M1BFI0_SOLTU	Uncharacterized protein. (186 aa)
	M1BW30_SOLTU	Uncharacterized protein; Belongs to the calmodulin family. (113 aa)
	AC58-2	Uncharacterized protein. (377 aa)
	Actin-79	Uncharacterized protein. (377 aa)
	AC97-2	Uncharacterized protein. (377 aa)
	Pot82	Uncharacterized protein. (377 aa)
	Calmodulin	Uncharacterized protein; Belongs to the calmodulin family. (173 aa)
	AC101	Actin-101; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth. (377 aa)
	Q38M72_SOLTU	Calmodulin-like; Belongs to the calmodulin family. (149 aa)
	PCM5	Calmodulin-5/6/7/8; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases. (149 aa)

Your Current Organism:

Solanum tuberosum

NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AC101	Calmodulin	P30173	M1E148	Actin-101; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth.	Uncharacterized protein; Belongs to the calmodulin family.	0.756
AC101	M0ZL26_SOLTU	P30173	M0ZL26	Actin-101; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth.	Uncharacterized protein.	0.798
AC101	M0ZLI7_SOLTU	P30173	M0ZLI7	Actin-101; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth.	Uncharacterized protein.	0.758
AC101	M1A3S2_SOLTU	P30173	M1A3S2	Actin-101; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth.	Uncharacterized protein; Belongs to the calmodulin family.	0.764
AC101	M1BFI0_SOLTU	P30173	M1BFI0	Actin-101; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth.	Uncharacterized protein.	0.774
AC101	M1BW30_SOLTU	P30173	M1BW30	Actin-101; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth.	Uncharacterized protein; Belongs to the calmodulin family.	0.764
AC101	M1D715_SOLTU	P30173	M1D715	Actin-101; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth.	Uncharacterized protein.	0.795
AC101	PCM5	P30173	Q7DMN9	Actin-101; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth.	Calmodulin-5/6/7/8; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.	0.770
AC101	Q38M72_SOLTU	P30173	Q38M72	Actin-101; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth.	Calmodulin-like; Belongs to the calmodulin family.	0.760
AC58-2	Calmodulin	M1C5F5	M1E148	Uncharacterized protein.	Uncharacterized protein; Belongs to the calmodulin family.	0.758
AC58-2	M0ZL26_SOLTU	M1C5F5	M0ZL26	Uncharacterized protein.	Uncharacterized protein.	0.796
AC58-2	M0ZLI7_SOLTU	M1C5F5	M0ZLI7	Uncharacterized protein.	Uncharacterized protein.	0.759
AC58-2	M1A3S2_SOLTU	M1C5F5	M1A3S2	Uncharacterized protein.	Uncharacterized protein; Belongs to the calmodulin family.	0.765
AC58-2	M1BFI0_SOLTU	M1C5F5	M1BFI0	Uncharacterized protein.	Uncharacterized protein.	0.775
AC58-2	M1BW30_SOLTU	M1C5F5	M1BW30	Uncharacterized protein.	Uncharacterized protein; Belongs to the calmodulin family.	0.765
AC58-2	M1D715_SOLTU	M1C5F5	M1D715	Uncharacterized protein.	Uncharacterized protein.	0.796
AC58-2	PCM5	M1C5F5	Q7DMN9	Uncharacterized protein.	Calmodulin-5/6/7/8; Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases.	0.772
AC58-2	Q38M72_SOLTU	M1C5F5	Q38M72	Uncharacterized protein.	Calmodulin-like; Belongs to the calmodulin family.	0.762
AC97-2	Calmodulin	M1CNK2	M1E148	Uncharacterized protein.	Uncharacterized protein; Belongs to the calmodulin family.	0.759
AC97-2	M0ZL26_SOLTU	M1CNK2	M0ZL26	Uncharacterized protein.	Uncharacterized protein.	0.801