STRINGSTRING
C-PHYA C-PHYA PHYA PHYA M1CN04_SOLTU M1CN04_SOLTU M1BB73_SOLTU M1BB73_SOLTU ERF4 ERF4 M1AWF1_SOLTU M1AWF1_SOLTU M1AFA9_SOLTU M1AFA9_SOLTU M1AF78_SOLTU M1AF78_SOLTU Pain-1 Pain-1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
C-PHYAPhytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. (1123 aa)
PHYAPhytochrome A; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region. Photoconversion of Pr to Pfr induces an array of morphogenic responses, whereas reconversion of Pfr to Pr cancels the induction of those responses. Pfr controls the expression of a number of nuclear genes including those encoding the small subunit of ribulose-bisphosphate carboxylase, chlorophyll A/B binding protein, protochlorophyllide reductas [...] (1123 aa)
M1CN04_SOLTUGlutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (411 aa)
M1BB73_SOLTUGlutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (411 aa)
ERF4AP2/ERF domain-containing protein. (223 aa)
M1AWF1_SOLTUUncharacterized protein. (380 aa)
M1AFA9_SOLTUGlutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (411 aa)
M1AF78_SOLTUGlutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (411 aa)
Pain-1Vacuolar invertase; Belongs to the glycosyl hydrolase 32 family. (639 aa)
Your Current Organism:
Solanum tuberosum
NCBI taxonomy Id: 4113
Other names: S. tuberosum, Solanum tuberosum L., Solanum tuberosum subsp. tuberosum, potato, potatoes
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