STRINGSTRING
ilvN ilvN EDR47931.1 EDR47931.1 pdxB pdxB EDR48039.1 EDR48039.1 ilvN-2 ilvN-2 EDR47759.1 EDR47759.1 EDR47766.1 EDR47766.1 sdaAB sdaAB EDR46962.1 EDR46962.1 ilvA ilvA EDR47081.1 EDR47081.1 sdaAB-2 sdaAB-2 EDR45575.1 EDR45575.1 EDR45691.1 EDR45691.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ilvNKEGG: chy:CHY_1594 4.3e-37 ilvN2; acetolactate synthase, small subunit K01653; COG: COG0440 Acetolactate synthase, small (regulatory) subunit; Psort location: Cytoplasmic, score: 8.87. (165 aa)
EDR47931.1Prephenate dehydratase; KEGG: det:DET0461 3.5e-49 tyrA; chorismate mutase / prephenate dehydratase K04093:K04518; COG: COG0077 Prephenate dehydratase; Psort location: Cytoplasmic, score: 9.98. (376 aa)
pdxBKEGG: bce:BC3248 2.1e-106 D-3-phosphoglycerate dehydrogenase K00058; COG: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Psort location: Cytoplasmic, score: 9.98; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (387 aa)
EDR48039.1KEGG: chy:CHY_1909 7.1e-115 aspartate kinase, monofunctional class K00928; COG: COG0527 Aspartokinases; Belongs to the aspartokinase family. (402 aa)
ilvN-2KEGG: noc:Noc_2519 6.8e-30 acetolactate synthase, small subunit K01653; COG: COG0440 Acetolactate synthase, small (regulatory) subunit; Psort location: Cytoplasmic, score: 8.87. (172 aa)
EDR47759.1KEGG: chy:CHY_1912 3.5e-129 hom; homoserine dehydrogenase K00003; COG: COG0460 Homoserine dehydrogenase; Psort location: Cytoplasmic, score: 8.87. (430 aa)
EDR47766.1RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (803 aa)
sdaABL-serine dehydratase, iron-sulfur-dependent, beta subunit; KEGG: tte:TTE1008 4.5e-49 sdaA; L-serine deaminase K01752; COG: COG1760 L-serine deaminase; Psort location: Cytoplasmic, score: 8.87; Belongs to the iron-sulfur dependent L-serine dehydratase family. (223 aa)
EDR46962.1ACT domain protein; KEGG: nph:NP5006A 9.7e-07 purU; formyltetrahydrofolate deformylase K01433; COG: COG3830 ACT domain-containing protein; Psort location: Cytoplasmic, score: 8.87; Belongs to the UPF0237 family. (90 aa)
ilvAKEGG: fnu:FN1411 1.5e-114 threonine dehydratase K01754; COG: COG1171 Threonine dehydratase. (404 aa)
EDR47081.1Aspartate kinase; KEGG: ctc:CTC02356 2.7e-129 aspartate kinase K00928; COG: COG0527 Aspartokinases; Psort location: Cytoplasmic, score: 8.87; Belongs to the aspartokinase family. (461 aa)
sdaAB-2L-serine dehydratase, iron-sulfur-dependent, beta subunit; KEGG: tte:TTE1008 2.0e-53 sdaA; L-serine deaminase K01752; COG: COG1760 L-serine deaminase; Psort location: Cytoplasmic, score: 8.87; Belongs to the iron-sulfur dependent L-serine dehydratase family. (224 aa)
EDR45575.1ACT domain protein; KEGG: sat:SYN_01196 9.6e-24 acetolactate synthase small subunit K01651; Psort location: Cytoplasmic, score: 8.87. (156 aa)
EDR45691.1KEGG: gka:GK2197 6.4e-66 tyrA; prephenate dehydrogenase K04517; COG: COG0287 Prephenate dehydrogenase; Psort location: Cytoplasmic, score: 8.87. (364 aa)
Your Current Organism:
Dorea formicigenerans
NCBI taxonomy Id: 411461
Other names: D. formicigenerans ATCC 27755, Dorea formicigenerans ATCC 27755
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