STRINGSTRING
EDM51459.1 EDM51459.1 EDM50228.1 EDM50228.1 EDM50208.1 EDM50208.1 EDM50166.1 EDM50166.1 sigE sigE EDM50163.1 EDM50163.1 EDM50562.1 EDM50562.1 EDM50410.1 EDM50410.1 spoVAE spoVAE spoVAD spoVAD spoVAC spoVAC EDM50386.1 EDM50386.1 spoVAA spoVAA spoIIAB spoIIAB EDM50381.1 EDM50381.1 EDM50343.1 EDM50343.1 EDM50263.1 EDM50263.1 EDM50839.1 EDM50839.1 EDM50730.1 EDM50730.1 EDM50686.1 EDM50686.1 spoIIR spoIIR EDM51067.1 EDM51067.1 soj soj EDM50874.1 EDM50874.1 EDM51290.1 EDM51290.1 EDM51186.1 EDM51186.1 EDM51179.1 EDM51179.1 EDM51462.1 EDM51462.1 EDM51461.1 EDM51461.1 EDM51460.1 EDM51460.1 EDM52533.1 EDM52533.1 spoIIP spoIIP EDM52503.1 EDM52503.1 EDM52418.1 EDM52418.1 EDM52425.1 EDM52425.1 EDM52429.1 EDM52429.1 EDM52265.1 EDM52265.1 EDM52281.1 EDM52281.1 EDM52089.1 EDM52089.1 EDM52127.1 EDM52127.1 EDM52143.1 EDM52143.1 dpaB dpaB EDM52015.1 EDM52015.1 spoVG spoVG EDM51705.1 EDM51705.1 yabP yabP EDM51710.1 EDM51710.1 EDM51712.1 EDM51712.1 EDM51644.1 EDM51644.1 EDM51344.1 EDM51344.1 spoIVA spoIVA EDM51387.1 EDM51387.1 EDM51427.1 EDM51427.1 EDM51440.1 EDM51440.1 EDM51457.1 EDM51457.1 EDM51456.1 EDM51456.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
EDM51459.1KEGG: cpf:CPF_2789 0.30 spoIIE; stage II sporulation protein E K06382; COG: NOG06161 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00. (382 aa)
EDM50228.1Hypothetical protein; KEGG: cvi:CV3516 0.57 serB; phosphoserine phosphatase K01079; COG: COG1533 DNA repair photolyase. (65 aa)
EDM50208.1Radical SAM domain protein; KEGG: reh:H16_A0887 3.0e-19 splB1; DNA repair photolyase K01669; COG: COG1533 DNA repair photolyase; Psort location: Cytoplasmic, score: 8.87. (302 aa)
EDM50166.1Sporulation protein, YlmC/YmxH family; KEGG: ctc:CTC00692 0.16 DNA helicase II K01529; COG: COG1873 Uncharacterized conserved protein; Psort location: Cytoplasmic, score: 8.87. (86 aa)
sigERNA polymerase sigma-E factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (244 aa)
EDM50163.1Putative sigma-E processing peptidase SpoIIGA; KEGG: cpr:CPR_1734 6.5e-18 spoIIGA; sporulation factor SpoIIGA K06383; COG: NOG09744 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99. (276 aa)
EDM50562.1SpoIID/LytB domain protein; KEGG: bcc:BCc_282 0.11 recB; RecB K01144; COG: COG2385 Sporulation protein and related proteins. (460 aa)
EDM50410.1Hsp20/alpha crystallin family protein; KEGG: stl:stu1873 0.40 ilvB; acetolactate synthase, large subunit K01652; COG: COG0071 Molecular chaperone (small heat shock protein). (148 aa)
spoVAEStage V sporulation protein AE; KEGG: tfu:Tfu_2682 0.37 proton-translocating NADH-quinone oxidoreductase, chain N K00343; COG: NOG13202 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99. (117 aa)
spoVADStage V sporulation protein AD; KEGG: cca:CCA00484 0.011 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648; COG: NOG06312 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 7.63. (336 aa)
spoVACStage V sporulation protein AC; KEGG: mbu:Mbur_1239 0.24 H+-transporting two-sector ATPase, C subunit K02124; COG: NOG09745 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 7.63. (152 aa)
EDM50386.1Hypothetical protein; KEGG: rba:RB1832 0.25 nqrB; sodium-translocating NADH dehydrogenase (ubiquinone) subunit nqrB K00347; COG: NOG11552 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 10.00. (143 aa)
spoVAAStage V sporulation protein AA; KEGG: wsu:WS0558 0.34 gatC; glutamyl-tRNA (Gln) amidotransferase subunit C K02435; COG: NOG11305 non supervised orthologous group. (208 aa)
spoIIABAnti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. (194 aa)
EDM50381.1KEGG: ava:Ava_0744 1.9e-06 anti-sigma-factor antagonist (STAS) and sugar transfersase K00996; COG: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor). (109 aa)
EDM50343.1Cell Wall Hydrolase; KEGG: bsu:BG13322 1.1e-13 ykvT; probable N-Acetylmuramoyl-L-alanine amidase, peptidoglycan hydrolase K01449; COG: COG1388 FOG: LysM repeat. (265 aa)
EDM50263.1Coat F domain protein; KEGG: sil:SPO2295 0.36 glnA; glutamine synthetase, type I K01915; COG: NOG14308 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (89 aa)
EDM50839.1SpoVG; KEGG: afu:AF0302 0.012 ugd-1; UDP-glucose dehydrogenase K00012; COG: COG2088 Uncharacterized protein, involved in the regulation of septum location; Psort location: Cytoplasmic, score: 8.87; Belongs to the SpoVG family. (209 aa)
EDM50730.1Hsp20/alpha crystallin family protein; KEGG: ljo:LJ1319 0.021 glycyl-tRNA synthetase beta chain K01879; COG: COG0071 Molecular chaperone (small heat shock protein). (151 aa)
EDM50686.1KEGG: sde:Sde_1783 0.48 DNA topoisomerase K01862; COG: COG4862 Negative regulator of genetic competence, sporulation and motility; Psort location: Cytoplasmic, score: 8.87. (237 aa)
spoIIRStage II sporulation protein R; KEGG: bba:Bd2044 0.84 dacA; D-alanyl-D-alanine carboxypeptidase K07258; COG: NOG13215 non supervised orthologous group. (218 aa)
EDM51067.1Hypothetical protein; KEGG: cne:CNA02290 0.31 isoleucine-tRNA ligase K01870; COG: NOG10026 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (313 aa)
sojSporulation initiation inhibitor protein Soj; KEGG: cch:Cag_1803 1.1e-47 ATPase, ParA family K03496; COG: COG1192 ATPases involved in chromosome partitioning; Psort location: Cytoplasmic, score: 8.87. (260 aa)
EDM50874.1Stage V sporulation protein G domain protein; KEGG: pfa:PF11_0256 0.45 pyruvate dehydrogenase E1 component, alpha subunit, putative K00161; COG: COG2088 Uncharacterized protein, involved in the regulation of septum location; Psort location: Cytoplasmic, score: 8.87; Belongs to the SpoVG family. (218 aa)
EDM51290.1CobQ/CobB/MinD/ParA nucleotide binding domain protein; KEGG: cch:Cag_1803 4.9e-68 ATPase, ParA family K03496; COG: COG1192 ATPases involved in chromosome partitioning. (254 aa)
EDM51186.1DHHA1 domain protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family. (687 aa)
EDM51179.1Sporulation initiation factor Spo0A domain protein; KEGG: afu:AF2314 0.33 ogt; methylated-DNA-protein-cysteine methyltransferase (ogt) K00567; COG: COG0784 FOG: CheY-like receiver; Psort location: Cytoplasmic, score: 8.87. (200 aa)
EDM51462.1Putative stage III sporulation protein AA; KEGG: ssn:SSO_0344 0.019 tauB; taurine ATP-binding component of a transport system K02049; COG: COG3854 Uncharacterized protein conserved in bacteria; Psort location: Cytoplasmic, score: 8.87. (283 aa)
EDM51461.1Putative stage III sporulation protein AB; KEGG: cal:orf19.4683 0.19 MLP1; myosin-like protein involved in translocation of macromolecules between the nucleoplasm and the NPC K01553; COG: NOG16867 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (173 aa)
EDM51460.1Stage III sporulation protein AC; KEGG: mca:MCA1548 0.55 succinate dehydrogenase, cytochrome b556 subunit, putative K00241; COG: NOG17863 non supervised orthologous group. (64 aa)
EDM52533.1Sporulation protein YtfJ; KEGG: psp:PSPPH_2135 0.018 thrS; threonyl-tRNA synthetase K01868; COG: COG3874 Uncharacterized conserved protein. (125 aa)
spoIIPStage II sporulation protein P; KEGG: wbr:WGLp018 0.042 surA; parvulin-like peptidyl-prolyl isomerase K03771; COG: NOG13213 non supervised orthologous group. (412 aa)
EDM52503.1RNA polymerase sigma-K factor; KEGG: reh:H16_A1626 2.5e-11 rpoD1; DNA-directed RNA polymerase sigma subunit (RpoD) K00960; COG: COG1191 DNA-directed RNA polymerase specialized sigma subunit; Psort location: Cytoplasmic, score: 8.87; Belongs to the sigma-70 factor family. (192 aa)
EDM52418.1Transporter gate domain protein; KEGG: bld:BLi03865 0.30 putative PTS system, glucitol/sorbitol-specific IIBC component; RBL02990 K02782:K02783; COG: COG0700 Uncharacterized membrane protein; Psort location: CytoplasmicMembrane, score: 9.26. (165 aa)
EDM52425.1Transporter gate domain protein; KEGG: rme:Rmet_1156 0.59 3-hydroxybutyrate dehydrogenase K00019; COG: COG2715 Uncharacterized membrane protein, required for spore maturation in B.subtilis; Psort location: CytoplasmicMembrane, score: 9.26. (202 aa)
EDM52429.1PSP1 C-terminal domain protein; KEGG: fnu:FN0522 0.37 exonuclease SBCC K03546; COG: COG1774 Uncharacterized homolog of PSP1; Psort location: Cytoplasmic, score: 8.87. (297 aa)
EDM52265.1CobQ/CobB/MinD/ParA nucleotide binding domain protein; KEGG: cch:Cag_1803 1.4e-31 ATPase, ParA family K03496; COG: COG1192 ATPases involved in chromosome partitioning; Psort location: Cytoplasmic, score: 8.87. (250 aa)
EDM52281.1Conserved domain protein; KEGG: cac:CAC0699 0.86 spore photoproduct lyase, splB K03716. (105 aa)
EDM52089.1KEGG: hne:HNE_0633 1.5e-09 peptidase, M23 family; COG: COG0739 Membrane proteins related to metalloendopeptidases; Psort location: Extracellular, score: 8.10. (268 aa)
EDM52127.1Small, acid-soluble spore protein, alpha/beta type; KEGG: psp:PSPPH_1641 0.66 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059; COG: NOG16862 non supervised orthologous group. (66 aa)
EDM52143.1Putative dipicolinic acid synthetase, A subunit; KEGG: btl:BALH_3431 3.7e-23 dapA; dipicolinate synthase, subunit A K01714; COG: NOG06157 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (276 aa)
dpaBDipicolinic acid synthetase, B subunit; KEGG: bcz:BCZK3561 2.0e-48 dapB; dipicolinate synthase subunit B K06411; COG: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; Psort location: Cytoplasmic, score: 9.97. (201 aa)
EDM52015.1SpoVG; KEGG: osa:4346656 0.996 Os09g0298200 K00975; COG: COG2088 Uncharacterized protein, involved in the regulation of septum location; Belongs to the SpoVG family. (150 aa)
spoVGPutative stage V sporulation protein G; Could be involved in septation. (90 aa)
EDM51705.1Putative stage V sporulation protein T; KEGG: chy:CHY_0657 0.012 sensor histidine kinase K07704; COG: COG2002 Regulators of stationary/sporulation gene expression; Psort location: Cytoplasmic, score: 9.98. (186 aa)
yabPSporulation protein YabP; KEGG: vvu:VV1_2604 0.46 spermidine/putrescine transport system ATP-binding protein K02052; COG: NOG13819 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (106 aa)
EDM51710.1Putative spore cortex biosynthesis protein YabQ; KEGG: ddi:DDB0184523 0.999 hypothetical protein K05544; COG: NOG21894 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.26. (171 aa)
EDM51712.1Putative stage II sporulation protein E; KEGG: tte:TTE2396 1.2e-44 rsbU; serine phosphatase RsbU, regulator of sigma subunit K06382; COG: COG2208 Serine phosphatase RsbU, regulator of sigma subunit; Psort location: CytoplasmicMembrane, score: 9.97. (567 aa)
EDM51644.1SpoIID/LytB domain protein; KEGG: cjr:CJE1335 0.0082 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549; COG: COG2385 Sporulation protein and related proteins; Psort location: CytoplasmicMembrane, score: 9.98. (342 aa)
EDM51344.1Hypothetical protein; KEGG: msu:MS1874 0.27 fabG; dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059; COG: NOG07866 non supervised orthologous group. (283 aa)
spoIVAStage IV sporulation protein A; KEGG: fnu:FN0522 0.0025 exonuclease SBCC K03546; COG: NOG05962 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (488 aa)
EDM51387.1KEGG: ddi:DDB0218103 0.098 hypothetical protein K05288; COG: COG3314 Uncharacterized protein conserved in bacteria; Psort location: CytoplasmicMembrane, score: 9.99. (310 aa)
EDM51427.1Acetyltransferase, GNAT family; KEGG: vfi:VF1542 6.6e-09 acetyltransferase K00680; COG: NOG36449 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (157 aa)
EDM51440.1Putative sporulation transcription factor Spo0A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. (265 aa)
EDM51457.1Putative stage III sporulation protein AG; KEGG: efa:EF3027 0.0066 htrA; serine protease DO K04771; COG: NOG11553 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (181 aa)
EDM51456.1Hypothetical protein; KEGG: ddi:DDB0186469 0.00024 hypothetical protein K01802; COG: NOG21930 non supervised orthologous group. (226 aa)
Your Current Organism:
Eubacterium ventriosum
NCBI taxonomy Id: 411463
Other names: E. ventriosum ATCC 27560, Eubacterium ventriosum ATCC 27560
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