STRINGSTRING
EDS08742.1 EDS08742.1 EDS08607.1 EDS08607.1 EDS08576.1 EDS08576.1 EDS08058.1 EDS08058.1 EDS08153.1 EDS08153.1 EDS08196.1 EDS08196.1 EDS08296.1 EDS08296.1 EDS08472.1 EDS08472.1 EDS08473.1 EDS08473.1 EDS08474.1 EDS08474.1 EDS07980.1 EDS07980.1 EDS08047.1 EDS08047.1 EDS07631.1 EDS07631.1 divIB divIB EDS07651.1 EDS07651.1 EDS07655.1 EDS07655.1 EDS07769.1 EDS07769.1 swrC swrC EDS06920.1 EDS06920.1 ftsL_1 ftsL_1 EDS06909.1 EDS06909.1 EDS06910.1 EDS06910.1 EDS06911.1 EDS06911.1 EDS06827.1 EDS06827.1 EDS06639.1 EDS06639.1 EDS06654.1 EDS06654.1 EDS06655.1 EDS06655.1 EDS06657.1 EDS06657.1 EDS06723.1 EDS06723.1 EDS06267.1 EDS06267.1 EDS06296.1 EDS06296.1 EDS06297.1 EDS06297.1 EDS06298.1 EDS06298.1 EDS06299.1 EDS06299.1 EDS06300.1 EDS06300.1 EDS06301.1 EDS06301.1 EDS06302.1 EDS06302.1 EDS06303.1 EDS06303.1 EDS06304.1 EDS06304.1 EDS06305.1 EDS06305.1 EDS06306.1 EDS06306.1 gluP gluP EDS06316.1 EDS06316.1 EDS06332.1 EDS06332.1 EDS05969.1 EDS05969.1 EDS05745.1 EDS05745.1 EDS04944.1 EDS04944.1 EDS04946.1 EDS04946.1 EDS04950.1 EDS04950.1 EDS05143.1 EDS05143.1 EDS05250.1 EDS05250.1 EDS05251.1 EDS05251.1 EDS04936.1 EDS04936.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EDS08742.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (291 aa)
EDS08607.1Cohesin domain protein; KEGG: bce:BC5339 8.8e-07 DNA-directed RNA polymerase delta chain K03048; COG: COG5129 Nuclear protein with HMG-like acidic region. (502 aa)
EDS08576.1Hypothetical protein; KEGG: cpf:CPF_1123 1.3e-16 cell wall-associated serine proteinase K01361; COG: NOG17334 non supervised orthologous group. (593 aa)
EDS08058.1Hypothetical protein; COG: NOG34170 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87. (247 aa)
EDS08153.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 7.80. (192 aa)
EDS08196.1Hypothetical protein. (457 aa)
EDS08296.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (253 aa)
EDS08472.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (260 aa)
EDS08473.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (429 aa)
EDS08474.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (1106 aa)
EDS07980.1Hypothetical protein; KEGG: ddi:DDB0167703 1.5e-05 hypothetical protein K01971; COG: KOG1181 FOG: Low-complexity; Psort location: Cytoplasmic, score: 8.87. (335 aa)
EDS08047.1Hypothetical protein; KEGG: nph:NP1018A 6.8e-07 atpH; H(+)-transporting two-sector ATPase subunit H.a (A-type ATP synthase) K02121; Psort location: Cytoplasmic, score: 8.87. (103 aa)
EDS07631.1Hypothetical protein. (84 aa)
divIBHypothetical protein; COG: COG1589 Cell division septal protein; Psort location: Cytoplasmic, score: 8.87. (256 aa)
EDS07651.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (87 aa)
EDS07655.1Hypothetical protein; KEGG: tte:TTE2564 2.6e-11 surA2; parvulin-like peptidyl-prolyl isomerase K07533; COG: COG0760 Parvulin-like peptidyl-prolyl isomerase. (356 aa)
EDS07769.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.87. (75 aa)
swrCRND transporter, HAE1/HME family, permease protein; KEGG: eci:UTI89_C2351 1.8e-66 yegO; hypothetical protein YegO K07789; COG: COG0841 Cation/multidrug efflux pump; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1271 aa)
EDS06920.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (292 aa)
ftsL_1COG: COG2919 Septum formation initiator. (107 aa)
EDS06909.1LysM domain protein; KEGG: lsl:LSL_0304 0.0019 phage lysin K01185; COG: NOG23722 non supervised orthologous group. (357 aa)
EDS06910.1Hypothetical protein; KEGG: oih:OB2490 0.00066 carboxy-terminal processing protease K03797. (420 aa)
EDS06911.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99. (304 aa)
EDS06827.1Hypothetical protein; KEGG: spa:M6_Spy0215 4.1e-32 peptidoglycan endo-beta-N-acetylglucosaminidase K01238; COG: COG5279 Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain; Psort location: Cytoplasmic, score: 8.87. (402 aa)
EDS06639.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (89 aa)
EDS06654.1KEGG: cyb:CYB_1515 0.0081 tetratricopeptide repeat/protein kinase domain protein K08884; COG: COG0457 FOG: TPR repeat. (458 aa)
EDS06655.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (44 aa)
EDS06657.1Arylsulfatase; KEGG: aha:AHA_2572 1.3e-08 sulfatase; COG: COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily; Psort location: CytoplasmicMembrane, score: 9.26. (734 aa)
EDS06723.1COG: COG4709 Predicted membrane protein; Psort location: CytoplasmicMembrane, score: 9.75. (154 aa)
EDS06267.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (328 aa)
EDS06296.1Hypothetical protein. (80 aa)
EDS06297.1Hypothetical protein; COG: COG1192 ATPases involved in chromosome partitioning; Psort location: Cytoplasmic, score: 8.87. (305 aa)
EDS06298.1Type II/IV secretion system protein; KEGG: reh:H16_A0983 1.5e-87 cpaF3; flp pilus assembly ATPase CpaF K01529; COG: COG4962 Flp pilus assembly protein, ATPase CpaF; Psort location: Cytoplasmic, score: 9.98. (410 aa)
EDS06299.1Bacterial type II secretion system domain protein F; COG: COG4965 Flp pilus assembly protein TadB; Psort location: Cytoplasmic, score: 8.87. (238 aa)
EDS06300.1Bacterial type II secretion system domain protein F; COG: COG2064 Flp pilus assembly protein TadC; Psort location: CytoplasmicMembrane, score: 9.75. (382 aa)
EDS06301.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (508 aa)
EDS06302.1Hypothetical protein. (294 aa)
EDS06303.1Peptidase, A24 family; KEGG: sth:STH1951 7.9e-13 type IV prepilin-like leader peptide processing enzyme K02654; COG: COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases; Psort location: CytoplasmicMembrane, score: 9.75. (143 aa)
EDS06304.1Hypothetical protein. (146 aa)
EDS06305.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (241 aa)
EDS06306.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (296 aa)
gluPPeptidase, S54 family; KEGG: ddi:DDB0218357 4.0e-20 hypothetical protein K08641; COG: COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid); Psort location: CytoplasmicMembrane, score: 9.99. (204 aa)
EDS06316.1Hypothetical protein; KEGG: bba:Bd1032 0.0026 mepA; hypothetical protein K07261; Psort location: CytoplasmicMembrane, score: 7.63. (314 aa)
EDS06332.1Tetratricopeptide repeat protein; KEGG: mpe:MYPE6470 1.2e-26 parC; DNA topoisomerase IV subunit A K02621; COG: KOG1181 FOG: Low-complexity; Psort location: Extracellular, score: 7.62. (978 aa)
EDS05969.1Hypothetical protein. (80 aa)
EDS05745.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.75. (146 aa)
EDS04944.1Hypothetical protein; KEGG: rle:RL2226 0.0022 cdsA; putative phosphatidate cytidylyltransferase K00981; COG: NOG07239 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99. (256 aa)
EDS04946.1PHP domain protein; KEGG: mma:MM0508 1.6e-14 isoleucyl-tRNA synthetase K01870; COG: COG0613 Predicted metal-dependent phosphoesterases (PHP family); Psort location: Cytoplasmic, score: 8.87. (272 aa)
EDS04950.1Hypothetical protein; COG: COG4932 Predicted outer membrane protein. (501 aa)
EDS05143.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (145 aa)
EDS05250.1ANTAR domain protein. (48 aa)
EDS05251.1Hypothetical protein. (132 aa)
EDS04936.1Hypothetical protein. (137 aa)
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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