6 items (Clostridium scindens) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	artM	KEGG: lin:lin0841 5.9e-95 similar to amino acid ABC transporter, ATP-binding protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49. (244 aa)
	tcyB_2	KEGG: hpa:HPAG1_0922 4.8e-29 amino acid ABC transporter, permease protein; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: CytoplasmicMembrane, score: 10.00. (226 aa)
	glnH	ABC transporter, substrate-binding protein, family 3; KEGG: bur:Bcep18194_A4695 9.9e-22 ABC polar amino acid transporter, periplasmic ligand binding protein K01713; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. (263 aa)
	glnQ_1	ABC transporter, ATP-binding protein; KEGG: cpe:CPE0602 2.9e-86 probable amino acid ABC transporter K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49. (248 aa)
	artQ	ABC transporter, permease protein; KEGG: bja:blr4464 8.6e-25 probable ABC transporter ATP-binding/permease protein K02028:K02029; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99. (230 aa)
	artP	ABC transporter, substrate-binding protein, family 3; KEGG: eci:UTI89_C2121 5.4e-30 fliY; cystine-binding periplasmic protein precursor K02030:K02424; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. (260 aa)

Your Current Organism:

Clostridium scindens

NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
artM	artP	CLOSCI_00659	CLOSCI_02182	KEGG: lin:lin0841 5.9e-95 similar to amino acid ABC transporter, ATP-binding protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.	ABC transporter, substrate-binding protein, family 3; KEGG: eci:UTI89_C2121 5.4e-30 fliY; cystine-binding periplasmic protein precursor K02030:K02424; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.	0.855
artM	artQ	CLOSCI_00659	CLOSCI_02181	KEGG: lin:lin0841 5.9e-95 similar to amino acid ABC transporter, ATP-binding protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.	ABC transporter, permease protein; KEGG: bja:blr4464 8.6e-25 probable ABC transporter ATP-binding/permease protein K02028:K02029; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.	0.956
artM	glnH	CLOSCI_00659	CLOSCI_00661	KEGG: lin:lin0841 5.9e-95 similar to amino acid ABC transporter, ATP-binding protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.	ABC transporter, substrate-binding protein, family 3; KEGG: bur:Bcep18194_A4695 9.9e-22 ABC polar amino acid transporter, periplasmic ligand binding protein K01713; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.	0.991
artM	tcyB_2	CLOSCI_00659	CLOSCI_00660	KEGG: lin:lin0841 5.9e-95 similar to amino acid ABC transporter, ATP-binding protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.	KEGG: hpa:HPAG1_0922 4.8e-29 amino acid ABC transporter, permease protein; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: CytoplasmicMembrane, score: 10.00.	0.996
artP	artM	CLOSCI_02182	CLOSCI_00659	ABC transporter, substrate-binding protein, family 3; KEGG: eci:UTI89_C2121 5.4e-30 fliY; cystine-binding periplasmic protein precursor K02030:K02424; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.	KEGG: lin:lin0841 5.9e-95 similar to amino acid ABC transporter, ATP-binding protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.	0.855
artP	artQ	CLOSCI_02182	CLOSCI_02181	ABC transporter, substrate-binding protein, family 3; KEGG: eci:UTI89_C2121 5.4e-30 fliY; cystine-binding periplasmic protein precursor K02030:K02424; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.	ABC transporter, permease protein; KEGG: bja:blr4464 8.6e-25 probable ABC transporter ATP-binding/permease protein K02028:K02029; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.	0.999
artP	glnQ_1	CLOSCI_02182	CLOSCI_02180	ABC transporter, substrate-binding protein, family 3; KEGG: eci:UTI89_C2121 5.4e-30 fliY; cystine-binding periplasmic protein precursor K02030:K02424; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.	ABC transporter, ATP-binding protein; KEGG: cpe:CPE0602 2.9e-86 probable amino acid ABC transporter K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.	0.990
artP	tcyB_2	CLOSCI_02182	CLOSCI_00660	ABC transporter, substrate-binding protein, family 3; KEGG: eci:UTI89_C2121 5.4e-30 fliY; cystine-binding periplasmic protein precursor K02030:K02424; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.	KEGG: hpa:HPAG1_0922 4.8e-29 amino acid ABC transporter, permease protein; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: CytoplasmicMembrane, score: 10.00.	0.994
artQ	artM	CLOSCI_02181	CLOSCI_00659	ABC transporter, permease protein; KEGG: bja:blr4464 8.6e-25 probable ABC transporter ATP-binding/permease protein K02028:K02029; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.	KEGG: lin:lin0841 5.9e-95 similar to amino acid ABC transporter, ATP-binding protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.	0.956
artQ	artP	CLOSCI_02181	CLOSCI_02182	ABC transporter, permease protein; KEGG: bja:blr4464 8.6e-25 probable ABC transporter ATP-binding/permease protein K02028:K02029; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.	ABC transporter, substrate-binding protein, family 3; KEGG: eci:UTI89_C2121 5.4e-30 fliY; cystine-binding periplasmic protein precursor K02030:K02424; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.	0.999
artQ	glnH	CLOSCI_02181	CLOSCI_00661	ABC transporter, permease protein; KEGG: bja:blr4464 8.6e-25 probable ABC transporter ATP-binding/permease protein K02028:K02029; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.	ABC transporter, substrate-binding protein, family 3; KEGG: bur:Bcep18194_A4695 9.9e-22 ABC polar amino acid transporter, periplasmic ligand binding protein K01713; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.	0.983
artQ	glnQ_1	CLOSCI_02181	CLOSCI_02180	ABC transporter, permease protein; KEGG: bja:blr4464 8.6e-25 probable ABC transporter ATP-binding/permease protein K02028:K02029; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.	ABC transporter, ATP-binding protein; KEGG: cpe:CPE0602 2.9e-86 probable amino acid ABC transporter K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.	0.997
artQ	tcyB_2	CLOSCI_02181	CLOSCI_00660	ABC transporter, permease protein; KEGG: bja:blr4464 8.6e-25 probable ABC transporter ATP-binding/permease protein K02028:K02029; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.	KEGG: hpa:HPAG1_0922 4.8e-29 amino acid ABC transporter, permease protein; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: CytoplasmicMembrane, score: 10.00.	0.591
glnH	artM	CLOSCI_00661	CLOSCI_00659	ABC transporter, substrate-binding protein, family 3; KEGG: bur:Bcep18194_A4695 9.9e-22 ABC polar amino acid transporter, periplasmic ligand binding protein K01713; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.	KEGG: lin:lin0841 5.9e-95 similar to amino acid ABC transporter, ATP-binding protein K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.	0.991
glnH	artQ	CLOSCI_00661	CLOSCI_02181	ABC transporter, substrate-binding protein, family 3; KEGG: bur:Bcep18194_A4695 9.9e-22 ABC polar amino acid transporter, periplasmic ligand binding protein K01713; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.	ABC transporter, permease protein; KEGG: bja:blr4464 8.6e-25 probable ABC transporter ATP-binding/permease protein K02028:K02029; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.	0.983
glnH	glnQ_1	CLOSCI_00661	CLOSCI_02180	ABC transporter, substrate-binding protein, family 3; KEGG: bur:Bcep18194_A4695 9.9e-22 ABC polar amino acid transporter, periplasmic ligand binding protein K01713; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.	ABC transporter, ATP-binding protein; KEGG: cpe:CPE0602 2.9e-86 probable amino acid ABC transporter K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.	0.837
glnH	tcyB_2	CLOSCI_00661	CLOSCI_00660	ABC transporter, substrate-binding protein, family 3; KEGG: bur:Bcep18194_A4695 9.9e-22 ABC polar amino acid transporter, periplasmic ligand binding protein K01713; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.	KEGG: hpa:HPAG1_0922 4.8e-29 amino acid ABC transporter, permease protein; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Psort location: CytoplasmicMembrane, score: 10.00.	0.999
glnQ_1	artP	CLOSCI_02180	CLOSCI_02182	ABC transporter, ATP-binding protein; KEGG: cpe:CPE0602 2.9e-86 probable amino acid ABC transporter K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.	ABC transporter, substrate-binding protein, family 3; KEGG: eci:UTI89_C2121 5.4e-30 fliY; cystine-binding periplasmic protein precursor K02030:K02424; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.	0.990
glnQ_1	artQ	CLOSCI_02180	CLOSCI_02181	ABC transporter, ATP-binding protein; KEGG: cpe:CPE0602 2.9e-86 probable amino acid ABC transporter K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.	ABC transporter, permease protein; KEGG: bja:blr4464 8.6e-25 probable ABC transporter ATP-binding/permease protein K02028:K02029; COG: COG0765 ABC-type amino acid transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.	0.997
glnQ_1	glnH	CLOSCI_02180	CLOSCI_00661	ABC transporter, ATP-binding protein; KEGG: cpe:CPE0602 2.9e-86 probable amino acid ABC transporter K02028; COG: COG1126 ABC-type polar amino acid transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.	ABC transporter, substrate-binding protein, family 3; KEGG: bur:Bcep18194_A4695 9.9e-22 ABC polar amino acid transporter, periplasmic ligand binding protein K01713; COG: COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.	0.837