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LacF_3 LacF_3 MglA_2 MglA_2 rbsA_1 rbsA_1 YteP YteP ugpA_4 ugpA_4 rbsA_3 rbsA_3 mglA_1 mglA_1 ycjO_3 ycjO_3 ugpA_1 ugpA_1 MglA_3 MglA_3 rbsA_2 rbsA_2 ycjO_1 ycjO_1 UgpA_3 UgpA_3 potB potB araP_2 araP_2 UgpA_5 UgpA_5 lacF_2 lacF_2 xylG xylG araP_1 araP_1 msmF msmF ycjO_2 ycjO_2 ugpA_2 ugpA_2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LacF_3COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00. (295 aa)
MglA_2ABC transporter, ATP-binding protein; KEGG: tte:TTE0763 1.9e-121 mglA4; ABC-type sugar (aldose) transport system, ATPase component K02056; COG: COG1129 ABC-type sugar transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49. (504 aa)
rbsA_1ABC transporter, ATP-binding protein; KEGG: tfu:Tfu_1921 2.3e-54 ABC-type sugar transport system ATPase component K02056; COG: COG1129 ABC-type sugar transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.82. (251 aa)
YtePCOG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00. (310 aa)
ugpA_4COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00. (314 aa)
rbsA_3KEGG: atc:AGR_L_85 8.1e-114 ABC transporter ATP binding protein K02056; COG: COG1129 ABC-type sugar transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49. (488 aa)
mglA_1ABC transporter, ATP-binding protein; KEGG: bha:BH2322 1.8e-125 putative simple sugar transport system ATP-binding protein K02056; COG: COG1129 ABC-type sugar transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49. (503 aa)
ycjO_3KEGG: pac:PPA0505 1.0e-05 ABC transporter, putative molybdenum transport system K02017:K02018; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00. (297 aa)
ugpA_1COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00. (308 aa)
MglA_3ABC transporter, ATP-binding protein; KEGG: ctc:CTC00861 2.7e-161 mglA; galactoside transport ATP-binding protein mglA K02056; COG: COG1129 ABC-type sugar transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49. (521 aa)
rbsA_2KEGG: mlo:mll7012 3.0e-123 ribose ABC transporter, ATP-binding protein K02056; COG: COG1129 ABC-type sugar transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49. (518 aa)
ycjO_1KEGG: pac:PPA0505 4.8e-05 ABC transporter, putative molybdenum transport system K02017:K02018; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00. (301 aa)
UgpA_3KEGG: cya:CYA_1846 0.00032 modB; molybdate ABC transporter, permease protein K02018; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00. (317 aa)
potBABC transporter, permease protein; KEGG: cdi:DIP0495 1.4e-10 putative molybdenum ABC transport system (integral membrane and ATP-binding proteins) K02017:K02018; COG: COG1176 ABC-type spermidine/putrescine transport system, permease component I; Psort location: CytoplasmicMembrane, score: 10.00. (276 aa)
araP_2KEGG: cyb:CYB_0398 2.4e-05 modB; molybdate ABC transporter, permease protein K02018; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00. (280 aa)
UgpA_5ABC transporter, permease protein; KEGG: hpa:HPAG1_0451 0.0086 molybdenum ABC transporter ModB K06022; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00. (291 aa)
lacF_2ABC transporter, permease protein; KEGG: ana:alr2433 4.8e-05 putative molybdate transport system permease/ATP-binding protein K02018; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00. (301 aa)
xylGKEGG: yps:YPTB1326 9.2e-90 ABC sugar transporter, fused ATP-binding subunits K02056; COG: KOG0058 Peptide exporter, ABC superfamily; Psort location: CytoplasmicMembrane, score: 9.49. (503 aa)
araP_1COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00. (301 aa)
msmFTransmembrane permease MsmF; KEGG: hpa:HPAG1_0451 1.3e-05 molybdenum ABC transporter ModB K06022; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00. (295 aa)
ycjO_2KEGG: ava:Ava_0243 7.8e-05 molybdate ABC transporter, permease protein K02018; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00. (298 aa)
ugpA_2ABC transporter, permease protein; KEGG: hpa:HPAG1_0451 1.9e-07 molybdenum ABC transporter ModB K06022; COG: COG1175 ABC-type sugar transport systems, permease components; Psort location: CytoplasmicMembrane, score: 10.00. (300 aa)
Your Current Organism:
Clostridium scindens
NCBI taxonomy Id: 411468
Other names: Clostridium scindens ATCC 35704, [. scindens ATCC 35704, [Clostridium] scindens ATCC 35704
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