STRINGSTRING
EFB77575.1 EFB77575.1 EFB76824.1 EFB76824.1 EFB75638.1 EFB75638.1 nifJ nifJ EFB74583.1 EFB74583.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EFB77575.1Pyridine nucleotide-disulfide oxidoreductase; KEGG: cno:NT01CX_0026 5.2e-135 2,4-dienoyl-CoA reductase, putative; Psort location: Cytoplasmic, score: 8.96. (686 aa)
EFB76824.1Class II glutamine amidotransferase; KEGG: syn:sll1502 0. gltB; NADH-dependent glutamate synthase large subunit K00268. (1516 aa)
EFB75638.14Fe-4S binding domain protein; KEGG: cno:NT01CX_0464 4.4e-90 Fe-hydrogenase large subunit family protein K00532. (507 aa)
nifJPyruvate synthase; KEGG: ctc:CTC01741 3.5e-296 pyruvate-flavodoxin oxidoreductase K03737. (909 aa)
EFB74583.1Hypothetical protein; KEGG: ctc:CTC01741 1.0e-113 pyruvate-flavodoxin oxidoreductase K03737. (386 aa)
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
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