STRINGSTRING
EFB77637.1 EFB77637.1 EFB77639.1 EFB77639.1 cydC cydC EFB77399.1 EFB77399.1 EFB77438.1 EFB77438.1 EFB77193.1 EFB77193.1 secA secA EFB77300.1 EFB77300.1 EFB76877.1 EFB76877.1 EFB76878.1 EFB76878.1 EFB76888.1 EFB76888.1 EFB76929.1 EFB76929.1 EFB77003.1 EFB77003.1 EFB77031.1 EFB77031.1 EFB77097.1 EFB77097.1 EFB77146.1 EFB77146.1 EFB77147.1 EFB77147.1 EFB76497.1 EFB76497.1 EFB76560.1 EFB76560.1 secF secF EFB76714.1 EFB76714.1 EFB76731.1 EFB76731.1 EFB76734.1 EFB76734.1 tuf tuf rpoC rpoC rpoB rpoB secG secG EFB76820.1 EFB76820.1 secE secE EFB76376.1 EFB76376.1 EFB76387.1 EFB76387.1 EFB75783.1 EFB75783.1 EFB75784.1 EFB75784.1 EFB75896.1 EFB75896.1 EFB75897.1 EFB75897.1 EFB75937.1 EFB75937.1 rpoA rpoA secY secY EFB75421.1 EFB75421.1 EFB75429.1 EFB75429.1 EFB75370.1 EFB75370.1 EFB75371.1 EFB75371.1 EFB75372.1 EFB75372.1 EFB75374.1 EFB75374.1 EFB75375.1 EFB75375.1 EFB75281.1 EFB75281.1 EFB75341.1 EFB75341.1 EFB75188.1 EFB75188.1 EFB75189.1 EFB75189.1 EFB75192.1 EFB75192.1 trxA trxA EFB75055.1 EFB75055.1 trxA-2 trxA-2 EFB74838.1 EFB74838.1 EFB74893.1 EFB74893.1 EFB74894.1 EFB74894.1 EFB74791.1 EFB74791.1 EFB74792.1 EFB74792.1 EFB74677.1 EFB74677.1 EFB74725.1 EFB74725.1 EFB74726.1 EFB74726.1 EFB74555.1 EFB74555.1 trxB trxB EFB74427.1 EFB74427.1 EFB74276.1 EFB74276.1 EFB74271.1 EFB74271.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EFB77637.1Transporter, major facilitator family protein; Psort location: CytoplasmicMembrane, score: 10.00. (388 aa)
EFB77639.1Low molecular weight phosphotyrosine protein phosphatase; KEGG: lsl:LSL_0888 2.1e-42 arsC; arsenate reductase; Psort location: Cytoplasmic, score: 8.96; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (135 aa)
cydCThiol reductant ABC exporter, CydC subunit; KEGG: bur:Bcep18194_B1962 1.3e-75 ABC efflux pump, fused ATPase and inner membrane subunits K06021:K06022; Psort location: CytoplasmicMembrane, score: 10.00. (551 aa)
EFB77399.1Hypothetical protein; KEGG: cal:orf19.4072 1.1e-06 HYR10; similar to cell surface flocculin K01186; Psort location: Extracellular, score: 9.64. (1033 aa)
EFB77438.1KEGG: msm:MSMEG_4753 1.5e-11 antioxidant, AhpC/TSA family protein K03386. (204 aa)
EFB77193.1Bacterial mobilization protein MobC; Psort location: Cytoplasmic, score: 8.96. (114 aa)
secAPreprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. (956 aa)
EFB77300.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (114 aa)
EFB76877.1KEGG: rru:Rru_A0864 3.9e-82 ABC transporter, transmembrane region K06020; Psort location: CytoplasmicMembrane, score: 10.00. (593 aa)
EFB76878.1KEGG: rru:Rru_A0863 1.1e-72 ABC transporter, transmembrane region K06020; Psort location: CytoplasmicMembrane, score: 10.00. (545 aa)
EFB76888.1Hypothetical protein; KEGG: rde:RD1_A0111 6.1e-06 virD1; VirD1. (147 aa)
EFB76929.1Hypothetical protein; KEGG: sat:SYN_03642 0.00036 thioredoxin peroxidase K03386. (260 aa)
EFB77003.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (674 aa)
EFB77031.1Transcriptional regulator, AsnC family; Psort location: Cytoplasmic, score: 8.96. (149 aa)
EFB77097.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (109 aa)
EFB77146.1ABC transporter, ATP-binding protein; KEGG: cch:Cag_1327 2.7e-67 ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00. (563 aa)
EFB77147.1ABC transporter, ATP-binding protein; KEGG: cch:Cag_0453 4.3e-76 ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00. (639 aa)
EFB76497.1Antioxidant, AhpC/TSA family; KEGG: btk:BT9727_0447 1.8e-36 bcp; bacterioferritin comigratory protein K03564. (187 aa)
EFB76560.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (656 aa)
secFExport membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. (772 aa)
EFB76714.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (273 aa)
EFB76731.1Transporter, major facilitator family protein; KEGG: bma:BMAA1647 1.0e-15 diaminobutyrate--pyruvate aminotransferase/membrane protein, putative K00836; Psort location: CytoplasmicMembrane, score: 10.00. (407 aa)
EFB76734.1Transporter, major facilitator family protein; KEGG: shn:Shewana3_1692 0.0054 Xaa-His dipeptidase K01270; Psort location: CytoplasmicMembrane, score: 10.00. (271 aa)
tufTranslation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (401 aa)
rpoCDNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1200 aa)
rpoBDNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1276 aa)
secGPreprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. (81 aa)
EFB76820.1ABC transporter, ATP-binding protein; KEGG: pen:PSEEN4987 6.2e-84 msbA; lipid A export ATP-binding/permease protein MsbA; Psort location: CytoplasmicMembrane, score: 10.00. (591 aa)
secEPreprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. (91 aa)
EFB76376.1Transcriptional regulator, AsnC family; KEGG: sai:Saci_2200 0.0060 uroM; uroporphyrin-III C-methyltransferase K02302; Psort location: Cytoplasmic, score: 8.96. (159 aa)
EFB76387.1Hypothetical protein; KEGG: cal:orf19.6568 2.2e-05 RHC18; involved in recombination repair K01553. (328 aa)
EFB75783.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46. (167 aa)
EFB75784.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46. (191 aa)
EFB75896.1KEGG: fal:FRAAL1741 5.8e-64 putative ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00. (579 aa)
EFB75897.1KEGG: reh:H16_A0776 4.3e-92 ABC-type transporter, ATPase and permease components: Prot2E family; Psort location: CytoplasmicMembrane, score: 9.99. (584 aa)
EFB75937.1KEGG: reh:H16_A0466 9.8e-54 ABC-type transporter, ATPase and permease components: HMT family; Psort location: CytoplasmicMembrane, score: 10.00. (599 aa)
rpoADNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (319 aa)
secYPreprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. (434 aa)
EFB75421.1Fibronectin type III domain protein; KEGG: dme:Dmel_CG10443 9.4e-06 Lar; Leukocyte-antigen-related-like K01104. (1764 aa)
EFB75429.1KEGG: ldb:Ldb0670 2.1e-35 phosphotyrosine protein phosphatase K01104; Psort location: Cytoplasmic, score: 8.96; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (149 aa)
EFB75370.1Putative thioredoxin; KEGG: ype:YPO3270 9.5e-17 trxC; thioredoxin 2 K03672; Psort location: Cytoplasmic, score: 9.97; Belongs to the thioredoxin family. (104 aa)
EFB75371.1Pyridine nucleotide-disulfide oxidoreductase; KEGG: ctc:CTC02552 5.3e-62 thioredoxin reductase K00384; Psort location: Cytoplasmic, score: 9.97. (283 aa)
EFB75372.1ABC transporter transmembrane region; KEGG: spd:SPD_0049 7.8e-23 comA; competence factor transporting ATP-binding/permease protein ComA; Psort location: CytoplasmicMembrane, score: 10.00. (412 aa)
EFB75374.1KEGG: pen:PSEEN3751 1.1e-23 ABC efflux transporter, permease/ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88. (156 aa)
EFB75375.1ABC transporter, ATP-binding protein; KEGG: aha:AHA_1356 9.5e-56 rtxB; RTX toxin transporter; Psort location: CytoplasmicMembrane, score: 10.00. (579 aa)
EFB75281.1Pyridine nucleotide-disulfide oxidoreductase; KEGG: ctc:CTC02435 4.0e-144 sarcosine oxidase alpha subunit K00301; Psort location: Cytoplasmic, score: 9.97. (420 aa)
EFB75341.1ABC transporter, ATP-binding protein; KEGG: cch:Cag_0453 9.2e-74 ATPase K06147; Psort location: CytoplasmicMembrane, score: 9.82. (429 aa)
EFB75188.1KEGG: fal:FRAAL1741 9.2e-27 putative ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00. (325 aa)
EFB75189.1KEGG: pen:PSEEN3751 8.4e-64 ABC efflux transporter, permease/ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00. (739 aa)
EFB75192.1Transcriptional regulator, AsnC family; Psort location: Cytoplasmic, score: 8.96. (143 aa)
trxAThioredoxin; KEGG: mbo:Mb3945 2.0e-23 trxC; thioredoxin TrxC (TRX) (MPT46) K03671; Psort location: Cytoplasmic, score: 9.26; Belongs to the thioredoxin family. (104 aa)
EFB75055.1Pyridine nucleotide-disulfide oxidoreductase; KEGG: ctc:CTC02552 2.2e-81 thioredoxin reductase K00384; Psort location: Cytoplasmic, score: 9.26. (290 aa)
trxA-2Thioredoxin; KEGG: sma:SAV7242 4.0e-18 trxA2; putative thioredoxin K03672; Psort location: Cytoplasmic, score: 9.26; Belongs to the thioredoxin family. (103 aa)
EFB74838.1Pyridine nucleotide-disulfide oxidoreductase; KEGG: mta:Moth_2420 9.2e-58 thioredoxin reductase K00384; Psort location: Cytoplasmic, score: 9.26. (311 aa)
EFB74893.1ABC transporter, ATP-binding protein; KEGG: cch:Cag_0453 1.9e-80 ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00. (620 aa)
EFB74894.1KEGG: fal:FRAAL1741 2.8e-71 putative ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 10.00. (577 aa)
EFB74791.1KEGG: rha:RHA1_ro09047 1.2e-06 ABC peptide transporter, permease component K02033; Psort location: CytoplasmicMembrane, score: 10.00. (349 aa)
EFB74792.1KEGG: rha:RHA1_ro09047 9.4e-49 ABC peptide transporter, permease component K02033; Psort location: CytoplasmicMembrane, score: 10.00. (305 aa)
EFB74677.1Hypothetical protein. (327 aa)
EFB74725.1KEGG: reh:H16_A0776 1.9e-73 ABC-type transporter, ATPase and permease components: Prot2E family; Psort location: CytoplasmicMembrane, score: 10.00. (629 aa)
EFB74726.1KEGG: reh:H16_A0776 1.4e-72 ABC-type transporter, ATPase and permease components: Prot2E family; Psort location: CytoplasmicMembrane, score: 10.00. (582 aa)
EFB74555.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.46. (174 aa)
trxBKEGG: mta:Moth_2420 1.9e-82 thioredoxin reductase K00384; Psort location: Cytoplasmic, score: 9.97. (308 aa)
EFB74427.1Putative Phosphate-binding protein PstS 2; KEGG: mst:Msp_0343 4.4e-19 pstS; PstS K02040. (318 aa)
EFB74276.1Multidrug resistance protein; KEGG: eci:UTI89_C5041 0.0031 yjiJ; hypothetical protein YjiJ K00403; Psort location: CytoplasmicMembrane, score: 10.00. (193 aa)
EFB74271.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (190 aa)
Your Current Organism:
Subdoligranulum variabile
NCBI taxonomy Id: 411471
Other names: S. variabile DSM 15176, Subdoligranulum variabile DSM 15176
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.