STRINGSTRING
rpsI rpsI rplL rplL rplJ rplJ rpmG rpmG rplI rplI rpmB rpmB rpsB rpsB rpmF rpmF rpsO rpsO rpsF rpsF rpsR rpsR rpmA rpmA rplU rplU rplS rplS rplQ rplQ rpmJ rpmJ rpsN rpsN rpsJ rpsJ rpsP rpsP rplT rplT rpmI rpmI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rpsIRibosomal protein S9; Belongs to the universal ribosomal protein uS9 family. (132 aa)
rplLRibosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family. (124 aa)
rplJRibosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. (171 aa)
rpmGRibosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family. (49 aa)
rplIRibosomal protein L9; Binds to the 23S rRNA. (151 aa)
rpmBRibosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. (62 aa)
rpsBRibosomal protein S2; Psort location: Cytoplasmic, score: 8.96; Belongs to the universal ribosomal protein uS2 family. (257 aa)
rpmFRibosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. (59 aa)
rpsORibosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. (84 aa)
rpsFRibosomal protein S6; Binds together with S18 to 16S ribosomal RNA. (94 aa)
rpsRRibosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. (71 aa)
rpmARibosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. (83 aa)
rplURibosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (106 aa)
rplSRibosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. (118 aa)
rplQRibosomal protein L17; Psort location: Cytoplasmic, score: 8.96. (113 aa)
rpmJRibosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family. (37 aa)
rpsNRibosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. (61 aa)
rpsJRibosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. (103 aa)
rpsPRibosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. (116 aa)
rplTRibosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (116 aa)
rpmIRibosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. (67 aa)
Your Current Organism:
Faecalibacterium prausnitzii A2165
NCBI taxonomy Id: 411483
Other names: F. prausnitzii A2-165, Faecalibacterium prausnitzii A2-165
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