(13 nodes) PAS domain, and PAS fold network (Hoeflea phototrophica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EDQ34678.2	PAS domain S-box. (1311 aa)
	EDQ35001.1	PAS domain S-box. (580 aa)
	EDQ32022.2	PAS domain S-box/diguanylate cyclase (GGDEF) domain protein. (888 aa)
	EDQ32052.1	PAS domain S-box. (1337 aa)
	EDQ32586.1	PAS domain S-box/diguanylate cyclase (GGDEF) domain protein. (976 aa)
	EDQ33004.1	PAS domain S-box. (694 aa)
	EDQ33492.1	PAS domain S-box. (875 aa)
	EDQ31933.1	Response regulator; Containing a CheY-like receiver domain and an HTH DNA-binding domain protein. (124 aa)
	EDQ31934.2	PAS domain S-box. (792 aa)
	EDQ31991.2	Diguanylate cyclase (GGDEF) domain protein. (456 aa)
	EDQ33269.1	Signal transduction histidine kinase. (848 aa)
	EDQ35609.1	Signal transduction histidine kinase. (788 aa)
	EDQ31774.1	Na+/proline symporter. (1166 aa)

Your Current Organism:

Hoeflea phototrophica

NCBI taxonomy Id: 411684
Other names: Ahrensia sp. DFL-43, H. phototrophica DFL-43, Hoeflea phototrophica DFL-43

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EDQ31774.1	EDQ31933.1	HPDFL43_21724	HPDFL43_13250	Na+/proline symporter.	Response regulator; Containing a CheY-like receiver domain and an HTH DNA-binding domain protein.	0.992
EDQ31774.1	EDQ31934.2	HPDFL43_21724	HPDFL43_13255	Na+/proline symporter.	PAS domain S-box.	0.993
EDQ31774.1	EDQ31991.2	HPDFL43_21724	HPDFL43_13540	Na+/proline symporter.	Diguanylate cyclase (GGDEF) domain protein.	0.983
EDQ31774.1	EDQ32022.2	HPDFL43_21724	HPDFL43_02894	Na+/proline symporter.	PAS domain S-box/diguanylate cyclase (GGDEF) domain protein.	0.901
EDQ31774.1	EDQ32052.1	HPDFL43_21724	HPDFL43_03044	Na+/proline symporter.	PAS domain S-box.	0.996
EDQ31774.1	EDQ32586.1	HPDFL43_21724	HPDFL43_03546	Na+/proline symporter.	PAS domain S-box/diguanylate cyclase (GGDEF) domain protein.	0.938
EDQ31774.1	EDQ33004.1	HPDFL43_21724	HPDFL43_08644	Na+/proline symporter.	PAS domain S-box.	0.966
EDQ31774.1	EDQ33269.1	HPDFL43_21724	HPDFL43_17376	Na+/proline symporter.	Signal transduction histidine kinase.	0.996
EDQ31774.1	EDQ33492.1	HPDFL43_21724	HPDFL43_09657	Na+/proline symporter.	PAS domain S-box.	0.989
EDQ31774.1	EDQ34678.2	HPDFL43_21724	HPDFL43_00735	Na+/proline symporter.	PAS domain S-box.	0.871
EDQ31774.1	EDQ35001.1	HPDFL43_21724	HPDFL43_02350	Na+/proline symporter.	PAS domain S-box.	0.995
EDQ31774.1	EDQ35609.1	HPDFL43_21724	HPDFL43_20482	Na+/proline symporter.	Signal transduction histidine kinase.	0.993
EDQ31933.1	EDQ31774.1	HPDFL43_13250	HPDFL43_21724	Response regulator; Containing a CheY-like receiver domain and an HTH DNA-binding domain protein.	Na+/proline symporter.	0.992
EDQ31933.1	EDQ31934.2	HPDFL43_13250	HPDFL43_13255	Response regulator; Containing a CheY-like receiver domain and an HTH DNA-binding domain protein.	PAS domain S-box.	0.995
EDQ31933.1	EDQ31991.2	HPDFL43_13250	HPDFL43_13540	Response regulator; Containing a CheY-like receiver domain and an HTH DNA-binding domain protein.	Diguanylate cyclase (GGDEF) domain protein.	0.629
EDQ31933.1	EDQ32022.2	HPDFL43_13250	HPDFL43_02894	Response regulator; Containing a CheY-like receiver domain and an HTH DNA-binding domain protein.	PAS domain S-box/diguanylate cyclase (GGDEF) domain protein.	0.832
EDQ31933.1	EDQ32052.1	HPDFL43_13250	HPDFL43_03044	Response regulator; Containing a CheY-like receiver domain and an HTH DNA-binding domain protein.	PAS domain S-box.	0.996
EDQ31933.1	EDQ32586.1	HPDFL43_13250	HPDFL43_03546	Response regulator; Containing a CheY-like receiver domain and an HTH DNA-binding domain protein.	PAS domain S-box/diguanylate cyclase (GGDEF) domain protein.	0.944
EDQ31933.1	EDQ33004.1	HPDFL43_13250	HPDFL43_08644	Response regulator; Containing a CheY-like receiver domain and an HTH DNA-binding domain protein.	PAS domain S-box.	0.905
EDQ31933.1	EDQ33269.1	HPDFL43_13250	HPDFL43_17376	Response regulator; Containing a CheY-like receiver domain and an HTH DNA-binding domain protein.	Signal transduction histidine kinase.	0.996