Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDR77683.1 | SDS25704.1 | SAMN04489834_0210 | SAMN04489834_1149 | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.786 |
| SDR77683.1 | SDS25744.1 | SAMN04489834_0210 | SAMN04489834_1150 | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Succinate dehydrogenase subunit A. | 0.699 |
| SDR77683.1 | SDS25842.1 | SAMN04489834_0210 | SAMN04489834_1152 | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Succinate dehydrogenase subunit C. | 0.941 |
| SDR77683.1 | SDS36200.1 | SAMN04489834_0210 | SAMN04489834_1343 | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | ATP synthase F1 subcomplex epsilon subunit. | 0.929 |
| SDR77683.1 | SDS76205.1 | SAMN04489834_0210 | SAMN04489834_2098 | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Cytochrome c oxidase subunit 3; Manually curated. | 0.872 |
| SDR77683.1 | SDS76306.1 | SAMN04489834_0210 | SAMN04489834_2100 | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Menaquinol-cytochrome c reductase iron-sulfur subunit precursor. | 0.999 |
| SDR77683.1 | SDS76350.1 | SAMN04489834_0210 | SAMN04489834_2101 | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Menaquinol-cytochrome c reductase cytochrome b subunit precursor. | 0.993 |
| SDR77683.1 | SDS76528.1 | SAMN04489834_0210 | SAMN04489834_2104 | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.855 |
| SDR77683.1 | SDS76571.1 | SAMN04489834_0210 | SAMN04489834_2105 | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Cytochrome c oxidase subunit 2; Manually curated. | 0.796 |
| SDR77683.1 | SDS95654.1 | SAMN04489834_0210 | SAMN04489834_2515 | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Succinate dehydrogenase / fumarate reductase flavoprotein subunit. | 0.699 |
| SDR77683.1 | SDT03720.1 | SAMN04489834_0210 | SAMN04489834_2689 | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Predicted Zn-dependent peptidase; Belongs to the peptidase M16 family. | 0.997 |
| SDR77683.1 | SDT04855.1 | SAMN04489834_0210 | SAMN04489834_2712 | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Succinate dehydrogenase / fumarate reductase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.786 |
| SDR77683.1 | SDT29926.1 | SAMN04489834_0210 | SAMN04489834_3357 | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Multisubunit sodium/proton antiporter, MrpD subunit. | 0.890 |
| SDR77683.1 | SDT29966.1 | SAMN04489834_0210 | SAMN04489834_3358 | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Multisubunit sodium/proton antiporter, MrpC subunit. | 0.653 |
| SDR77683.1 | SdhA | SAMN04489834_0210 | SAMN04489834_2711 | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Succinate dehydrogenase subunit A. | 0.699 |
| SDR77683.1 | atpA | SAMN04489834_0210 | SAMN04489834_1340 | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.601 |
| SDR77683.1 | atpD | SAMN04489834_0210 | SAMN04489834_1342 | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.553 |
| SDR77683.1 | atpE | SAMN04489834_0210 | SAMN04489834_1337 | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.555 |
| SDR77683.1 | atpG | SAMN04489834_0210 | SAMN04489834_1341 | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.788 |
| SDR77683.1 | atpH | SAMN04489834_0210 | SAMN04489834_1339 | NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | ATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.681 |
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