(24 nodes) Mixed, incl. Cysteine-type deubiquitinase activity, and Long-chain fatty acid-CoA ligase activity network (Trichoderma virens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G9MDG8_HYPVG	TFIIS central domain-containing protein. (878 aa)
	G9MDR6_HYPVG	AMP-binding domain-containing protein. (563 aa)
	G9MDZ7_HYPVG	Uncharacterized protein. (430 aa)
	G9MEC1_HYPVG	Uncharacterized protein; Belongs to the peptidase C19 family. (1155 aa)
	G9MEL7_HYPVG	Uncharacterized protein. (267 aa)
	G9MFP4_HYPVG	Uncharacterized protein. (348 aa)
	G9MG97_HYPVG	Uncharacterized protein. (950 aa)
	G9MGN5_HYPVG	SWIM-type domain-containing protein. (196 aa)
	G9MJ11_HYPVG	OTU domain-containing protein. (312 aa)
	G9MMY9_HYPVG	Uncharacterized protein. (1572 aa)
	G9MMZ0_HYPVG	Uncharacterized protein. (1027 aa)
	TRIVIDRAFT_349	BAH domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (1029 aa)
	G9MNM4_HYPVG	USP domain-containing protein; Belongs to the peptidase C19 family. (1303 aa)
	G9MQD0_HYPVG	Zn(2)-C6 fungal-type domain-containing protein. (550 aa)
	G9MQQ2_HYPVG	Ubiquitin carboxyl-terminal hydrolase. (780 aa)
	G9MTI1_HYPVG	Zn(2)-C6 fungal-type domain-containing protein. (780 aa)
	G9MW42_HYPVG	Ubiquitin-like domain-containing protein. (1249 aa)
	G9MZD6_HYPVG	Uncharacterized protein. (1768 aa)
	G9N208_HYPVG	Zn(2)-C6 fungal-type domain-containing protein. (679 aa)
	G9N365_HYPVG	USP domain-containing protein; Belongs to the peptidase C19 family. (2535 aa)
	G9N7L5_HYPVG	DOMON domain-containing protein. (398 aa)
	G9N9R9_HYPVG	Uncharacterized protein. (1802 aa)
	G9NA60_HYPVG	Uncharacterized protein. (298 aa)
	G9NAZ6_HYPVG	WD_REPEATS_REGION domain-containing protein. (1032 aa)

Your Current Organism:

Trichoderma virens

NCBI taxonomy Id: 413071
Other names: T. virens Gv29-8, Trichoderma virens Gv29-8

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G9MDG8_HYPVG	G9MEC1_HYPVG	G9MDG8	G9MEC1	TFIIS central domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.574
G9MDG8_HYPVG	G9MNM4_HYPVG	G9MDG8	G9MNM4	TFIIS central domain-containing protein.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.546
G9MDG8_HYPVG	G9MZD6_HYPVG	G9MDG8	G9MZD6	TFIIS central domain-containing protein.	Uncharacterized protein.	0.423
G9MDG8_HYPVG	G9N365_HYPVG	G9MDG8	G9N365	TFIIS central domain-containing protein.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.848
G9MDG8_HYPVG	G9N9R9_HYPVG	G9MDG8	G9N9R9	TFIIS central domain-containing protein.	Uncharacterized protein.	0.439
G9MDR6_HYPVG	G9MEC1_HYPVG	G9MDR6	G9MEC1	AMP-binding domain-containing protein.	Uncharacterized protein; Belongs to the peptidase C19 family.	0.607
G9MDR6_HYPVG	G9MFP4_HYPVG	G9MDR6	G9MFP4	AMP-binding domain-containing protein.	Uncharacterized protein.	0.620
G9MDR6_HYPVG	G9MNM4_HYPVG	G9MDR6	G9MNM4	AMP-binding domain-containing protein.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.607
G9MDR6_HYPVG	G9MW42_HYPVG	G9MDR6	G9MW42	AMP-binding domain-containing protein.	Ubiquitin-like domain-containing protein.	0.554
G9MDR6_HYPVG	G9MZD6_HYPVG	G9MDR6	G9MZD6	AMP-binding domain-containing protein.	Uncharacterized protein.	0.607
G9MDR6_HYPVG	G9N365_HYPVG	G9MDR6	G9N365	AMP-binding domain-containing protein.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.607
G9MDR6_HYPVG	G9N7L5_HYPVG	G9MDR6	G9N7L5	AMP-binding domain-containing protein.	DOMON domain-containing protein.	0.482
G9MDR6_HYPVG	G9NAZ6_HYPVG	G9MDR6	G9NAZ6	AMP-binding domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.585
G9MDZ7_HYPVG	G9MW42_HYPVG	G9MDZ7	G9MW42	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.453
G9MDZ7_HYPVG	G9NA60_HYPVG	G9MDZ7	G9NA60	Uncharacterized protein.	Uncharacterized protein.	0.418
G9MEC1_HYPVG	G9MDG8_HYPVG	G9MEC1	G9MDG8	Uncharacterized protein; Belongs to the peptidase C19 family.	TFIIS central domain-containing protein.	0.574
G9MEC1_HYPVG	G9MDR6_HYPVG	G9MEC1	G9MDR6	Uncharacterized protein; Belongs to the peptidase C19 family.	AMP-binding domain-containing protein.	0.607
G9MEC1_HYPVG	G9MEL7_HYPVG	G9MEC1	G9MEL7	Uncharacterized protein; Belongs to the peptidase C19 family.	Uncharacterized protein.	0.453
G9MEC1_HYPVG	G9MFP4_HYPVG	G9MEC1	G9MFP4	Uncharacterized protein; Belongs to the peptidase C19 family.	Uncharacterized protein.	0.655
G9MEC1_HYPVG	G9MJ11_HYPVG	G9MEC1	G9MJ11	Uncharacterized protein; Belongs to the peptidase C19 family.	OTU domain-containing protein.	0.480