(23 nodes) Malonyl-CoA ACP transacylase, ACP-binding network (Trichoderma virens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	G9MUJ3_HYPVG	Putative polyketide synthase. (2409 aa)
	G9MHB3_HYPVG	Putative polyketide synthase. (2590 aa)
	G9MDM6_HYPVG	MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family. (1017 aa)
	G9MSL5_HYPVG	Putative PKS-NRPS protein. (3821 aa)
	G9MSK4_HYPVG	Putative PKS-NRPS protein. (3699 aa)
	G9MRS4_HYPVG	Putative polyketide synthase. (2210 aa)
	G9MPI7_HYPVG	Non-ribosomal peptide synthetase. (16510 aa)
	G9NBV8_HYPVG	Putative polyketide synthase. (2329 aa)
	Tex1	Non-robosomal peptide synthetase. (20891 aa)
	G9N001_HYPVG	Putative PKS-NRPS protein. (3966 aa)
	G9MZG5_HYPVG	Putative polyketide synthase. (2505 aa)
	G9MY54_HYPVG	Putative PKS-NRPS protein. (3989 aa)
	G9MXY7_HYPVG	Putative conidial pigment polyketide synthase PksP/Alb1. (2147 aa)
	G9MXP3_HYPVG	Putative polyketide synthase. (1884 aa)
	G9MUC6_HYPVG	Carrier domain-containing protein. (2638 aa)
	G9MUA5_HYPVG	Putative polyketide synthase. (2459 aa)
	G9MSW9_HYPVG	Putative polyketide synthase. (3094 aa)
	G9NBV5_HYPVG	Putative polyketide synthase. (1736 aa)
	G9N8C5_HYPVG	Polyketide synthase,putative. (1742 aa)
	G9N854_HYPVG	Putative polyketide synthase. (2369 aa)
	G9N7H4_HYPVG	Putative polyketide synthase. (2354 aa)
	G9N4V1_HYPVG	Carrier domain-containing protein. (2596 aa)
	G9N4B2_HYPVG	Putative polyketide synthase. (2381 aa)

Your Current Organism:

Trichoderma virens

NCBI taxonomy Id: 413071
Other names: T. virens Gv29-8, Trichoderma virens Gv29-8

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G9MHB3_HYPVG	G9MPI7_HYPVG	G9MHB3	G9MPI7	Putative polyketide synthase.	Non-ribosomal peptide synthetase.	0.454
G9MHB3_HYPVG	Tex1	G9MHB3	G9N3N0	Putative polyketide synthase.	Non-robosomal peptide synthetase.	0.454
G9MPI7_HYPVG	G9MHB3_HYPVG	G9MPI7	G9MHB3	Non-ribosomal peptide synthetase.	Putative polyketide synthase.	0.454
G9MPI7_HYPVG	G9MRS4_HYPVG	G9MPI7	G9MRS4	Non-ribosomal peptide synthetase.	Putative polyketide synthase.	0.454
G9MPI7_HYPVG	G9MSK4_HYPVG	G9MPI7	G9MSK4	Non-ribosomal peptide synthetase.	Putative PKS-NRPS protein.	0.454
G9MPI7_HYPVG	G9MSL5_HYPVG	G9MPI7	G9MSL5	Non-ribosomal peptide synthetase.	Putative PKS-NRPS protein.	0.454
G9MPI7_HYPVG	G9MSW9_HYPVG	G9MPI7	G9MSW9	Non-ribosomal peptide synthetase.	Putative polyketide synthase.	0.454
G9MPI7_HYPVG	G9MUA5_HYPVG	G9MPI7	G9MUA5	Non-ribosomal peptide synthetase.	Putative polyketide synthase.	0.454
G9MPI7_HYPVG	G9MUC6_HYPVG	G9MPI7	G9MUC6	Non-ribosomal peptide synthetase.	Carrier domain-containing protein.	0.454
G9MPI7_HYPVG	G9MUJ3_HYPVG	G9MPI7	G9MUJ3	Non-ribosomal peptide synthetase.	Putative polyketide synthase.	0.454
G9MPI7_HYPVG	G9MXP3_HYPVG	G9MPI7	G9MXP3	Non-ribosomal peptide synthetase.	Putative polyketide synthase.	0.455
G9MPI7_HYPVG	G9MXY7_HYPVG	G9MPI7	G9MXY7	Non-ribosomal peptide synthetase.	Putative conidial pigment polyketide synthase PksP/Alb1.	0.455
G9MPI7_HYPVG	G9MY54_HYPVG	G9MPI7	G9MY54	Non-ribosomal peptide synthetase.	Putative PKS-NRPS protein.	0.454
G9MPI7_HYPVG	G9MZG5_HYPVG	G9MPI7	G9MZG5	Non-ribosomal peptide synthetase.	Putative polyketide synthase.	0.454
G9MPI7_HYPVG	G9N001_HYPVG	G9MPI7	G9N001	Non-ribosomal peptide synthetase.	Putative PKS-NRPS protein.	0.454
G9MPI7_HYPVG	G9N4B2_HYPVG	G9MPI7	G9N4B2	Non-ribosomal peptide synthetase.	Putative polyketide synthase.	0.454
G9MPI7_HYPVG	G9N4V1_HYPVG	G9MPI7	G9N4V1	Non-ribosomal peptide synthetase.	Carrier domain-containing protein.	0.454
G9MPI7_HYPVG	G9N7H4_HYPVG	G9MPI7	G9N7H4	Non-ribosomal peptide synthetase.	Putative polyketide synthase.	0.454
G9MPI7_HYPVG	G9N854_HYPVG	G9MPI7	G9N854	Non-ribosomal peptide synthetase.	Putative polyketide synthase.	0.454
G9MPI7_HYPVG	G9N8C5_HYPVG	G9MPI7	G9N8C5	Non-ribosomal peptide synthetase.	Polyketide synthase,putative.	0.454