(17 nodes) Mixed, incl. Peptide/nickel binding protein, MppA-type, and Oligopeptide/dipeptide ABC transporter, C-terminal network (Polyangium brachysporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AAW51_0065	ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (569 aa)
	AAW51_0066	Peptide ABC transporter permease. (347 aa)
	AAW51_0067	Peptide ABC transporter permease. (312 aa)
	AAW51_0068	Bicyclomycin resistance protein. (595 aa)
	AAW51_0860	ABC transporter substrate-binding protein. (528 aa)
	AAW51_4772	ABC transporter ATP-binding protein; ABC.PE.A1; Belongs to the ABC transporter superfamily. (334 aa)
	AAW51_4773	Methionine ABC transporter ATP-binding protein; ABC.PE.A; Belongs to the ABC transporter superfamily. (330 aa)
	AAW51_4774	ABC transporter permease; ABC.PE.P1. (304 aa)
	AAW51_4775	ABC transporter substrate-binding protein; ABC.PE.S. (523 aa)
	AAW51_4777	ABC transporter permease; ABC.PE.P. (326 aa)
	AAW51_4778	ABC transporter substrate-binding protein; ABC.PE.S. (531 aa)
	AAW51_5339	ABC transporter substrate-binding protein; ABC.PE.S. (497 aa)
	AAW51_5340	Peptide ABC transporter ATP-binding protein; ABC.PE.A1; Belongs to the ABC transporter superfamily. (294 aa)
	AAW51_5341	ABC.PE.A; Belongs to the ABC transporter superfamily. (339 aa)
	AAW51_5342	Dipeptide transport system permease protein DppC. (168 aa)
	AAW51_5343	Dipeptide transport system permease protein DppC. (129 aa)
	AAW51_5344	ABC transporter permease; ABC.PE.P. (320 aa)

Your Current Organism:

Polyangium brachysporum

NCBI taxonomy Id: 413882
Other names: ATCC 53080, DSM 7029, NBRC 100090, [. brachysporum, [Polyangium] brachysporum, strain K481-B101

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
AAW51_0065	AAW51_0066	ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	Peptide ABC transporter permease.	0.937
AAW51_0065	AAW51_0067	ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	Peptide ABC transporter permease.	0.940
AAW51_0065	AAW51_0068	ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	Bicyclomycin resistance protein.	0.796
AAW51_0065	AAW51_0860	ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	ABC transporter substrate-binding protein.	0.432
AAW51_0065	AAW51_4774	ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	ABC transporter permease; ABC.PE.P1.	0.888
AAW51_0065	AAW51_4775	ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	ABC transporter substrate-binding protein; ABC.PE.S.	0.416
AAW51_0065	AAW51_4777	ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	ABC transporter permease; ABC.PE.P.	0.827
AAW51_0065	AAW51_5339	ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	ABC transporter substrate-binding protein; ABC.PE.S.	0.415
AAW51_0065	AAW51_5342	ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	Dipeptide transport system permease protein DppC.	0.949
AAW51_0065	AAW51_5344	ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	ABC transporter permease; ABC.PE.P.	0.835
AAW51_0066	AAW51_0065	Peptide ABC transporter permease.	ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.	0.937
AAW51_0066	AAW51_0067	Peptide ABC transporter permease.	Peptide ABC transporter permease.	0.981
AAW51_0066	AAW51_0068	Peptide ABC transporter permease.	Bicyclomycin resistance protein.	0.904
AAW51_0066	AAW51_0860	Peptide ABC transporter permease.	ABC transporter substrate-binding protein.	0.671
AAW51_0066	AAW51_4772	Peptide ABC transporter permease.	ABC transporter ATP-binding protein; ABC.PE.A1; Belongs to the ABC transporter superfamily.	0.932
AAW51_0066	AAW51_4773	Peptide ABC transporter permease.	Methionine ABC transporter ATP-binding protein; ABC.PE.A; Belongs to the ABC transporter superfamily.	0.947
AAW51_0066	AAW51_4775	Peptide ABC transporter permease.	ABC transporter substrate-binding protein; ABC.PE.S.	0.658
AAW51_0066	AAW51_4777	Peptide ABC transporter permease.	ABC transporter permease; ABC.PE.P.	0.909
AAW51_0066	AAW51_4778	Peptide ABC transporter permease.	ABC transporter substrate-binding protein; ABC.PE.S.	0.624
AAW51_0066	AAW51_5339	Peptide ABC transporter permease.	ABC transporter substrate-binding protein; ABC.PE.S.	0.684