(44 nodes) Mixed, incl. Sulfur metabolism, and Nitrogen metabolism network (Polyangium brachysporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	nrtC	Nitrate ABC transporter ATP-binding protein. (266 aa)
	nrtB	Nitrate ABC transporter permease. (257 aa)
	nrtA	Nitrate transporter. (417 aa)
	ssuA	Sulfonate transport system substrate-binding protein. (372 aa)
	AAW51_2699	Nitrilotriacetate monooxygenase. (451 aa)
	AAW51_2705	Hypothetical protein. (479 aa)
	ssuA-2	TetR family transcriptional regulator. (367 aa)
	ssuC	Sulfonate ABC transporter. (284 aa)
	ssuC-2	Taurine ABC transporter permease. (280 aa)
	ssuC-3	Sulfonate ABC transporter. (302 aa)
	ssuC-4	Taurine ABC transporter permease. (278 aa)
	ssuB	Sulfonate ABC transporter ATP-binding protein. (277 aa)
	AAW51_3079	Aliphatic sulfonate ABC transporter substrate-binding protein; ABC.SN.S. (332 aa)
	AAW51_3080	Nitrate transport permease nrtB; ABC.SN.P. (260 aa)
	AAW51_3081	Sulfonate ABC transporter ATP-binding protein; ABC.SN.A. (285 aa)
	AAW51_3082	Urea carboxylase. (245 aa)
	AAW51_3083	Urea carboxylase. (223 aa)
	AAW51_3084	Urea carboxylase. (1205 aa)
	AAW51_3085	Allophanate hydrolase. (609 aa)
	nrtA-2	Nitrate ABC transporter substrate-binding protein. (462 aa)
	nrtA-3	Nitrate ABC transporter substrate-binding protein. (460 aa)
	nrtB-2	Nitrate ABC transporter permease. (290 aa)
	nrtC-2	Nitrate ABC transporter ATPase. (277 aa)
	ssuA-3	Nitrate ABC transporter substrate-binding protein. (375 aa)
	tauD	Taurine dioxygenase. (336 aa)
	AAW51_4564	Hypothetical protein. (56 aa)
	AAW51_4565	GntR family transcriptional regulator. (264 aa)
	AAW51_4566	Oxidoreductase. (582 aa)
	AAW51_4567	4Fe-4S ferredoxin. (80 aa)
	AAW51_4568	Nitrate ABC transporter substrate-binding protein; ABC.SN.S. (478 aa)
	AAW51_4569	ABC transporter permease; ABC.SN.P. (285 aa)
	AAW51_4570	Sulfonate ABC transporter ATP-binding protein; ABC.SN.A. (287 aa)
	AAW51_4571	PBS lyase. (322 aa)
	AAW51_4572	Hypothetical protein. (90 aa)
	ssuB-2	Sulfonate transport system ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. (300 aa)
	ssuC-5	ABC transporter permease. (276 aa)
	ssuD	Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. (402 aa)
	ssuA-4	Sulfonate ABC transporter substrate-binding protein. (329 aa)
	ssuA-5	ABC transporter substrate-binding protein. (346 aa)
	ssuE	FMN reductase. (188 aa)
	AAW51_4743	Membrane protein. (187 aa)
	AAW51_4744	NitT/TauT family transport system ATP-binding protein; ABC.SN.A. (251 aa)
	AAW51_4745	ABC transporter ATP-binding protein; ABC.SN.P. (301 aa)
	AAW51_4746	Nitrate ABC transporter substrate-binding protein; ABC.SN.S. (342 aa)

Your Current Organism:

Polyangium brachysporum

NCBI taxonomy Id: 413882
Other names: ATCC 53080, DSM 7029, NBRC 100090, [. brachysporum, [Polyangium] brachysporum, strain K481-B101

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AAW51_2699	AAW51_4568	AAW51_2699	AAW51_4568	Nitrilotriacetate monooxygenase.	Nitrate ABC transporter substrate-binding protein; ABC.SN.S.	0.473
AAW51_2699	AAW51_4746	AAW51_2699	AAW51_4746	Nitrilotriacetate monooxygenase.	Nitrate ABC transporter substrate-binding protein; ABC.SN.S.	0.405
AAW51_2699	ssuA	AAW51_2699	AAW51_2696	Nitrilotriacetate monooxygenase.	Sulfonate transport system substrate-binding protein.	0.659
AAW51_2699	ssuA-2	AAW51_2699	AAW51_2706	Nitrilotriacetate monooxygenase.	TetR family transcriptional regulator.	0.630
AAW51_2699	ssuA-3	AAW51_2699	AAW51_4560	Nitrilotriacetate monooxygenase.	Nitrate ABC transporter substrate-binding protein.	0.657
AAW51_2699	ssuA-4	AAW51_2699	AAW51_4588	Nitrilotriacetate monooxygenase.	Sulfonate ABC transporter substrate-binding protein.	0.577
AAW51_2699	ssuA-5	AAW51_2699	AAW51_4589	Nitrilotriacetate monooxygenase.	ABC transporter substrate-binding protein.	0.600
AAW51_2699	ssuB-2	AAW51_2699	AAW51_4584	Nitrilotriacetate monooxygenase.	Sulfonate transport system ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.	0.454
AAW51_2699	ssuC-4	AAW51_2699	AAW51_2710	Nitrilotriacetate monooxygenase.	Taurine ABC transporter permease.	0.480
AAW51_2699	ssuC-5	AAW51_2699	AAW51_4585	Nitrilotriacetate monooxygenase.	ABC transporter permease.	0.518
AAW51_2699	ssuE	AAW51_2699	AAW51_4590	Nitrilotriacetate monooxygenase.	FMN reductase.	0.814
AAW51_2699	tauD	AAW51_2699	AAW51_4561	Nitrilotriacetate monooxygenase.	Taurine dioxygenase.	0.642
AAW51_2705	AAW51_4568	AAW51_2705	AAW51_4568	Hypothetical protein.	Nitrate ABC transporter substrate-binding protein; ABC.SN.S.	0.401
AAW51_2705	ssuA	AAW51_2705	AAW51_2696	Hypothetical protein.	Sulfonate transport system substrate-binding protein.	0.679
AAW51_2705	ssuA-2	AAW51_2705	AAW51_2706	Hypothetical protein.	TetR family transcriptional regulator.	0.910
AAW51_2705	ssuA-3	AAW51_2705	AAW51_4560	Hypothetical protein.	Nitrate ABC transporter substrate-binding protein.	0.666
AAW51_2705	ssuB	AAW51_2705	AAW51_2711	Hypothetical protein.	Sulfonate ABC transporter ATP-binding protein.	0.628
AAW51_2705	ssuC	AAW51_2705	AAW51_2707	Hypothetical protein.	Sulfonate ABC transporter.	0.729
AAW51_2705	ssuC-2	AAW51_2705	AAW51_2708	Hypothetical protein.	Taurine ABC transporter permease.	0.715
AAW51_2705	ssuC-3	AAW51_2705	AAW51_2709	Hypothetical protein.	Sulfonate ABC transporter.	0.619