(7 nodes) Branched-chain amino acid transmembrane transporter activity network (Polyangium brachysporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	livM	ABC transporter; Belongs to the binding-protein-dependent transport system permease family. (660 aa)
	livM-2	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (431 aa)
	livM-3	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (343 aa)
	livM-4	ABC transporter ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family. (362 aa)
	urtC	Amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (376 aa)
	AAW51_4672	Branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family. (380 aa)
	livM-5	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. (354 aa)

Your Current Organism:

Polyangium brachysporum

NCBI taxonomy Id: 413882
Other names: ATCC 53080, DSM 7029, NBRC 100090, [. brachysporum, [Polyangium] brachysporum, strain K481-B101

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AAW51_4672	livM	AAW51_4672	AAW51_0483	Branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	0.520
AAW51_4672	livM-5	AAW51_4672	AAW51_4804	Branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	0.461
livM	AAW51_4672	AAW51_0483	AAW51_4672	ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	Branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.	0.520
livM	livM-2	AAW51_0483	AAW51_2602	ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	0.524
livM	livM-3	AAW51_0483	AAW51_3607	ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	0.583
livM	livM-4	AAW51_0483	AAW51_3888	ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.	0.587
livM	livM-5	AAW51_0483	AAW51_4804	ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	0.555
livM	urtC	AAW51_0483	AAW51_4436	ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	Amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	0.495
livM-2	livM	AAW51_2602	AAW51_0483	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	0.524
livM-3	livM	AAW51_3607	AAW51_0483	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	0.583
livM-4	livM	AAW51_3888	AAW51_0483	ABC transporter ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	0.587
livM-5	AAW51_4672	AAW51_4804	AAW51_4672	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	Branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.	0.461
livM-5	livM	AAW51_4804	AAW51_0483	ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	0.555
urtC	livM	AAW51_4436	AAW51_0483	Amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.	ABC transporter; Belongs to the binding-protein-dependent transport system permease family.	0.495