(54 nodes) MetI-like superfamily network (Polyangium brachysporum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AAW51_4826	Amino acid ABC transporter permease; ABC.PA.P. (250 aa)
	chiF	Lactose ABC transporter permease. (309 aa)
	glpQ	Sugar ABC transporter permease. (270 aa)
	glpP	ABC transporter permease. (294 aa)
	AAW51_5342	Dipeptide transport system permease protein DppC. (168 aa)
	AAW51_5344	ABC transporter permease; ABC.PE.P. (320 aa)
	afuB-2	Iron ABC transporter permease. (745 aa)
	gtsB	ABC transporter permease. (294 aa)
	gtsC	Sugar ABC transporter permease. (282 aa)
	nrtB	Nitrate ABC transporter permease. (257 aa)
	afuB	Iron ABC transporter permease. (533 aa)
	ugpA	Glycerol-3-phosphate transporter permease. (293 aa)
	ugpE	Glycerol-3-phosphate transporter membrane protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (284 aa)
	gltK	Amino acid ABC transporter permease. (221 aa)
	gltJ	Glutamate ABC transporter permease. (236 aa)
	opuC	Osmoprotectant transport system substrate-binding protein. (543 aa)
	AAW51_0255	ABC transporter permease. (217 aa)
	smoG	Mannitol ABC transporter permease. (278 aa)
	smoF	Sugar ABC transporter permease. (319 aa)
	msmG	Sugar ABC transporter permease. (283 aa)
	msmF	ABC transporter permease. (296 aa)
	AAW51_0067	Peptide ABC transporter permease. (312 aa)
	AAW51_0066	Peptide ABC transporter permease. (347 aa)
	gtsC-2	Sugar ABC transporter permease. (305 aa)
	gtsB-2	Sugar ABC transporter permease. (303 aa)
	ssuC-4	Taurine ABC transporter permease. (278 aa)
	ssuC-3	Sulfonate ABC transporter. (302 aa)
	ssuC-2	Taurine ABC transporter permease. (280 aa)
	ssuC	Sulfonate ABC transporter. (284 aa)
	AAW51_2507	Peptide ABC transporter permease; ABC.PE.P1. (482 aa)
	AAW51_2506	Peptide ABC transporter permease; ABC.PE.P. (327 aa)
	pstA	Phosphate transport system permease protein. (314 aa)
	pstC	Phosphate transporter permease subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (319 aa)
	metI	Metal ABC transporter permease. (219 aa)
	AAW51_1791	Cytochrome C biogenesis protein. (357 aa)
	potH	Spermidine/putrescine ABC transporter permease. (322 aa)
	potI	Spermidine/putrescine ABC transporter permease. (284 aa)
	malF	Maltose transporter membrane protein. (522 aa)
	malG	Maltose transporter permease. (296 aa)
	AAW51_3080	Nitrate transport permease nrtB; ABC.SN.P. (260 aa)
	thuF	ABC transporter permease. (285 aa)
	thuG	Sugar ABC transporter permease. (283 aa)
	nrtB-2	Nitrate ABC transporter permease. (290 aa)
	phnE	Phosphonate ABC transporter permease. (271 aa)
	modB	Molybdate ABC transporter permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (229 aa)
	cysW	Sulfate transport system permease protein. (307 aa)
	cysU	Sulfate transporter; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (280 aa)
	AAW51_4569	ABC transporter permease; ABC.SN.P. (285 aa)
	ssuC-5	ABC transporter permease. (276 aa)
	AAW51_1790	Sugar ABC transporter permease. (276 aa)
	AAW51_4745	ABC transporter ATP-binding protein; ABC.SN.P. (301 aa)
	AAW51_4774	ABC transporter permease; ABC.PE.P1. (304 aa)
	AAW51_4777	ABC transporter permease; ABC.PE.P. (326 aa)
	chiG	Sugar ABC transporter permease. (281 aa)

Your Current Organism:

Polyangium brachysporum

NCBI taxonomy Id: 413882
Other names: ATCC 53080, DSM 7029, NBRC 100090, [. brachysporum, [Polyangium] brachysporum, strain K481-B101

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AAW51_0066	AAW51_0067	AAW51_0066	AAW51_0067	Peptide ABC transporter permease.	Peptide ABC transporter permease.	0.981
AAW51_0066	AAW51_2506	AAW51_0066	AAW51_2506	Peptide ABC transporter permease.	Peptide ABC transporter permease; ABC.PE.P.	0.904
AAW51_0066	AAW51_4777	AAW51_0066	AAW51_4777	Peptide ABC transporter permease.	ABC transporter permease; ABC.PE.P.	0.909
AAW51_0066	AAW51_5344	AAW51_0066	AAW51_5344	Peptide ABC transporter permease.	ABC transporter permease; ABC.PE.P.	0.914
AAW51_0067	AAW51_0066	AAW51_0067	AAW51_0066	Peptide ABC transporter permease.	Peptide ABC transporter permease.	0.981
AAW51_0067	AAW51_2507	AAW51_0067	AAW51_2507	Peptide ABC transporter permease.	Peptide ABC transporter permease; ABC.PE.P1.	0.901
AAW51_0067	AAW51_4774	AAW51_0067	AAW51_4774	Peptide ABC transporter permease.	ABC transporter permease; ABC.PE.P1.	0.913
AAW51_0067	AAW51_5342	AAW51_0067	AAW51_5342	Peptide ABC transporter permease.	Dipeptide transport system permease protein DppC.	0.905
AAW51_0255	AAW51_4826	AAW51_0255	AAW51_4826	ABC transporter permease.	Amino acid ABC transporter permease; ABC.PA.P.	0.476
AAW51_0255	gltJ	AAW51_0255	AAW51_0997	ABC transporter permease.	Glutamate ABC transporter permease.	0.504
AAW51_0255	gltK	AAW51_0255	AAW51_0998	ABC transporter permease.	Amino acid ABC transporter permease.	0.684
AAW51_0255	opuC	AAW51_0255	AAW51_0767	ABC transporter permease.	Osmoprotectant transport system substrate-binding protein.	0.426
AAW51_1790	AAW51_1791	AAW51_1790	AAW51_1791	Sugar ABC transporter permease.	Cytochrome C biogenesis protein.	0.978
AAW51_1790	chiF	AAW51_1790	AAW51_4928	Sugar ABC transporter permease.	Lactose ABC transporter permease.	0.899
AAW51_1790	glpP	AAW51_1790	AAW51_5320	Sugar ABC transporter permease.	ABC transporter permease.	0.644
AAW51_1790	gtsB	AAW51_1790	AAW51_1767	Sugar ABC transporter permease.	ABC transporter permease.	0.796
AAW51_1790	gtsB-2	AAW51_1790	AAW51_2949	Sugar ABC transporter permease.	Sugar ABC transporter permease.	0.869
AAW51_1790	malF	AAW51_1790	AAW51_3019	Sugar ABC transporter permease.	Maltose transporter membrane protein.	0.869
AAW51_1790	msmF	AAW51_1790	AAW51_0089	Sugar ABC transporter permease.	ABC transporter permease.	0.891
AAW51_1790	smoF	AAW51_1790	AAW51_0166	Sugar ABC transporter permease.	Sugar ABC transporter permease.	0.851