Your Input: | |
| | hypB | Hydrogenase nickel incorporation protein; Similar to Escherichia coli, and Escherichia coli O6 hydrogenase isoenzymes nickel incorporation protein HypB or b2727 or c3287 SWALL:HYPB_ECOLI (SWALL:P24190) (290 aa) fasta scores: E(): 3e-28, 40.74 38d in 216 aa. (223 aa) |
| | CBO0432 | Putative pyridine nucleotide-disulphide oxidoreductase; Similar to Moorella thermoacetica formate dehydrogenase beta subunit fdhB SWALL:P77907 (EMBL:U73807) (707 aa) fasta scores: E(): 5.5e-36, 34.26 38d in 502 aa. (892 aa) |
| | hypA | Similar to Bradyrhizobium japonicum hydrogenase nickel incorporation protein HypA or bll6932 SWALL:HYPA_BRAJA (SWALL:Q45256) (113 aa) fasta scores: E(): 6.6e-08, 30 38d in 110 aa. (114 aa) |
| | CBO0434 | Putative membrane protein; No significant database matches. (328 aa) |
| | thiE | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. (205 aa) |
| | thiM | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. (263 aa) |
| | thiD1 | Phosphomethylpyrimidine kinase; This CDS is also similar to CBO0771 (52.308 identity in 260 aa overlap). (266 aa) |
| | CBO0518 | Putative oxygen binding protein. (137 aa) |
| | CBO0538 | Putative membrane protein. (146 aa) |
| | CBO0539 | Putative membrane protein. (331 aa) |
| | CBO0540 | Hypothetical protein; No significant database matches. (46 aa) |
| | CBO0541 | Putative membrane-associated protease. (269 aa) |
| | CBO0545 | Putative [2Fe-2S] binding protein. (70 aa) |
| | mscL | Putative antibiotic resistance ABC transporter (pseudogene); Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell. (133 aa) |
| | CBO0556 | Putative membrane protein. (227 aa) |
| | CBO0657 | Crp-family transcriptional regulator. (236 aa) |
| | norV | Anaerobic nitric oxide reductase flavorubredoxin. (410 aa) |
| | ric | Conserved hypothetical protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family. (232 aa) |
| | CBO0660 | Conserved hypothetical protein. (251 aa) |
| | CBO0767A | Conserved hypothetical protein. (153 aa) |
| | CBO0769 | Putative methyltransferase. (252 aa) |
| | thiD2 | Phosphomethylpyrimidine kinase; This CDS is also similar to CBO0451 (52.308 identity in 260 aa overlap). (275 aa) |
| | CBO0772 | Hypothetical protein; No significant database matches. (77 aa) |
| | sspH | Putative small, acid-soluble spore protein; Also similar to CBO1236 (31.7 38d.). (62 aa) |
| | CBO0790 | Putative membrane protein. (259 aa) |
| | sseA | Putative 3-mercaptopyruvate sulfurtransferase. (279 aa) |
| | cobC | Alpha-ribazole-5'-phosphate phosphatase; Belongs to the phosphoglycerate mutase family. (204 aa) |
| | cobS | Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. (248 aa) |
| | CBO0822 | Conserved hypothetical protein. (258 aa) |
| | CBO0907 | Putative membrane protein. (182 aa) |
| | cobU | Bifunctional cobalamin biosynthesis protein [includes: cobinamide kinase; cobinamide phosphate guanylyltransferase]. (185 aa) |
| | cobQ | Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (493 aa) |
| | cbiB | Cobalamin biosynthesis protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. (320 aa) |
| | cobD | L-threonine-O-3-phosphate decarboxylase. (362 aa) |
| | cbiM | Putative cobalt transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. (239 aa) |
| | cbiN | Cobalt transport protein cbin; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family. (99 aa) |
| | cbiQ | Putative cobalt transport protein. (227 aa) |
| | CBO0919 | Putative precorrin oxidase. (220 aa) |
| | hemC | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. (290 aa) |
| | hemD | Porphyrin biosynthesis protein [includes: uroporphyrin-III C-methyltransferase and uroporphyrinogen-III synthase; Belongs to the precorrin methyltransferase family. (486 aa) |
| | CBO0922 | Conserved hypothetical protein. (60 aa) |
| | hemB | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. (324 aa) |
| | cobB | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. (440 aa) |
| | cobH | Precorrin-8x methylmutase. (208 aa) |
| | CBO0928 | Putative phosphohydrolase. (202 aa) |
| | CBO0929 | Conserved hypothetical protein. (122 aa) |
| | CBO0930 | Similar to N-terminal regions of many MerR-family transcriptional regulators including Clostridium acetobutylicum transcriptional regulator, merr family cap0178 SWALL:Q97TD4 (EMBL:AE001438) (123 aa) fasta scores: E(): 0.00041, 36.97 38d in 119 aa. (424 aa) |
| | CBO0931 | Putative acetyltransferase. (142 aa) |
| | CBO0932 | Conserved hypothetical protein. (233 aa) |
| | CBO0933 | Putative nitroreductase. (173 aa) |
| | CBO0934 | Putative membrane protein. (103 aa) |
| | CBO0935 | Conserved hypothetical protein. (177 aa) |
| | cbiD | Cobalamin biosynthesis protein; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. (359 aa) |
| | cbiE | Precorrin-6y C5,15-methyltransferase [decarboxylating]. (216 aa) |
| | CBO0938 | Putative membrane-associated CAAX amino terminal protease. (167 aa) |
| | cbiT | Precorrin-8w decarboxylase. (191 aa) |
| | CBO0940 | Putative exported protein. (143 aa) |
| | CBO0941 | Putative membrane protein. (183 aa) |
| | CBO0941A | Putative membrane protein. (104 aa) |
| | CBO0942 | Putative membrane protein; No significant database matches. (73 aa) |
| | CBO0943 | Putative membrane protein. (150 aa) |
| | CBO0945 | Putative isochorismatase. (179 aa) |
| | cbiL | Precorrin-2 C20-methyltransferase; Methylates cobalt-precorrin-2 at the C-20 position to produce cobalt-precorrin-3A in the anaerobic cobalamin biosynthesis pathway. (238 aa) |
| | cbiF | Precorrin-4 C11-methyltransferase. (254 aa) |
| | cbiG | Putative cobalamin biosynthesis protein. (350 aa) |
| | cbiH | Precorrin-3b C17-methyltransferase. (243 aa) |
| | cbiJ | Precorrin-6x reductase. (255 aa) |
| | CBO0951 | Probable transport protein. (162 aa) |
| | cbiK | Cobalt chelatase. (260 aa) |
| | pduX | Propanediol utilization protein. (279 aa) |
| | cobA | cob(I)alamin adenosyltransferase. (173 aa) |
| | CBO0955 | Crp-family transcriptional regulator. (235 aa) |
| | nirC | Putative nitrite transporter. (254 aa) |
| | asrA | Anaerobic sulfite reductase subunit A. (342 aa) |
| | asrB | Anaerobic sulfite reductase subunit B. (265 aa) |
| | asrC | Anaerobic sulfite reductase subunit c. (321 aa) |
| | CBO0993A | Putative membrane protein. (100 aa) |
| | CBO0996 | Putative rubrerythrin. (143 aa) |
| | CBO1032 | Probable acetyltransferase. (145 aa) |
| | norV-2 | Anaerobic nitric oxide reductase flavorubredoxin. (396 aa) |
| | rbr | Putative rubrerythrin. (195 aa) |
| | cooS | Putative oxidoreductase, acetyl-CoA synthase subunit. (628 aa) |
| | CBO1332 | Putative oxidoreductase, electron transfer subunit. (147 aa) |
| | CBO1333 | Putative oxidoreductase, NAD/FAD binding subunit. (408 aa) |
| | CBO1340 | Conserved hypothetical protein. (111 aa) |
| | CBO1341 | Putative iron-sulfur cluster binding protein. (425 aa) |
| | CBO1546 | Putative glyoxalase. (120 aa) |
| | CBO1658 | Signal-transduction and transcriptional-control protein (pseudogene); Large repeat genearted by the insertion of prophage. (210 aa) |
| | CBO1659 | Conserved hypothetical protein. (184 aa) |
| | CBO1674 | Putative dehydrogenase. (174 aa) |
| | asrC-2 | Anaerobic sulfite reductase subunit C; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (284 aa) |
| | ftnA | Ferritin; Iron-storage protein. (171 aa) |
| | CBO1828 | Conserved hypothetical protein; Belongs to the UPF0145 family. (103 aa) |
| | CBO1828A | Conserved hypothetical protein. (77 aa) |
| | CBO1829 | Conserved hypothetical protein; Similar to the C-terminal region of several oxidoreductases such as Eubacterium acidaminophilum HymA protein. (80 aa) |
| | CBO1830 | Putative hydrogenase; This CDS is also similar to CBO1832 (49.914 38d. in 579 aa overlap). (574 aa) |
| | CBO1831 | Conserved hypothetical protein; Similar to the C-terminal region of stage II sporulation protein E from various organisms including Bacillus subtilis stage II sporulation protein eE SpoIIE or spoiih or bsu00640 SWALL:SP2E_BACSU (SWALL:P37475) (827 aa) fasta scores: E(): 0.0013, 27.01 38d in 211 aa. (389 aa) |
| | CBO1832 | Putative hydrogenase; This CDS is also similar to CBO1830 (49.914 38d. in 579 aa overlap). (579 aa) |
| | hypE | Hydrogenase isoenzymes formation protein. (334 aa) |
| | hypD | Hydrogenase isoenzymes formation protein. (357 aa) |
| | hypF | Hydrogenase maturation protein. (812 aa) |
| | hypQ4 | Conserved hypothetical protein. (85 aa) |
| | CBO1837 | Hypothetical protein; No significant database matches. (36 aa) |
| | hypQ3 | Conserved hypothetical protein. (171 aa) |
| | hupD | Putative hydrogenase maturation protein. (138 aa) |
| | hupL | Hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (471 aa) |
| | hupS | Hydrogenase small subunit. (290 aa) |
| | CBO1969 | Conserved hypothetical protein. (271 aa) |
| | CBO1970 | Putative cobalt ABC transporter, permease protein. (241 aa) |
| | ccmA-4 | Putative cobalt ABC transporter, ATP-binding protein. (477 aa) |
| | CBO1972 | Putative membrane protein. (188 aa) |
| | codA | Putative RNA methyltransferase (partial CDS); Partial CDS. Similar to C-terminal region of many RNA methyltransferases including Bacillus cereus tRNA (uracil-5-)-methyltransferase bc0364 SWALL:Q814A6 (EMBL:AE016999) (458 aa) fasta scores: E(): 1.6e-11,62.96 38d in 54 aa; was marked partial. (421 aa) |
| | codB | Putative cytosine permease. (423 aa) |
| | CBO2074 | Hypothetical protein; No significant database hits. (50 aa) |
| | CBO2075 | Conserved hypothetical protein. (374 aa) |
| | CBO2076 | Hypothetical protein; No significant database hits. (52 aa) |
| | CBO2207 | Pfam match to entry PF00903 Glyoxalase,Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily, score 18.6, E-value 3.3e-05. (462 aa) |
| | pdxA | Putative 4-hydroxythreonine-4-phosphate dehydrogenase; Belongs to the PdxA family. (334 aa) |
| | CBO2209 | Conserved hypothetical protein. (445 aa) |
| | CBO2210 | DeoR family regulatory proteins. (252 aa) |
| | cooS-2 | Putative carbon monoxide dehydrogenase beta subunit. (654 aa) |
| | hypA-2 | Putative hydrogenase nickel incorporation protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase. (113 aa) |
| | hypB-2 | Similar to the C-terminal region of Escherichia coli, and Escherichia coli O6 hydrogenase isoenzymes nickel incorporation protein HypB or b2727 or c3287 SWALL:HYPB_ECOLI (SWALL:P24190) (290 aa) fasta scores: E(): 3e-25, 42.99 38d in 207 aa. Similar to the full length Thermoanaerobacter tengcongensis Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase TTE0130 SWALL:Q8RDB1 (EMBL:AE012986) (218 aa) fasta scores: E(): 5.2e-25,44.66 38d in 206 aa. (212 aa) |
| | thiM-2 | Conserved hypothetical protein (partial); Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. (276 aa) |
| | CBO2254 | Putative membrane protein; Similar to Enterococcus faecalis hypothetical protein EF2778 SWALL:Q830K3 (EMBL:AE016955) (176 aa) fasta scores: E(): 1.1e-25, 46.62 38d in 178 aa, and to Streptococcus pneumoniae conserved domain protein SP0723 SWALL:Q97RS0 (EMBL:AE007380) (174 aa) fasta scores: E(): 1.1e-22, 44.57 38d in 166 aa. CDS is extended at the C-terminus in comparison to orthologues. CDS feature contains an long overlap with the downstream CDS (CBO2253). Possible frameshift mutation after codon 158. (189 aa) |
| | bioD | Putative dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. (227 aa) |
| | bioB-2 | Putative biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (318 aa) |
| | CBO2260 | BioY family protein. (186 aa) |
| | CBO2260A | Putative membrane protein. (109 aa) |
| | CBO2261 | MarR family regulatory protein. (141 aa) |
| | CBO2262 | Putative membrane protein. (198 aa) |
| | CBO2263 | Metallopeptidase family M24 protein; Similar to an internal region of Homo sapiens xaa-Pro aminopeptidase 2 precursor XPNPEP2 SWALL:XPP2_HUMAN (SWALL:O43895) (674 aa) fasta scores: E(): 1.1e-58, 31.58 38d in 611 aa. Similar to full length Clostridium perfringens probable aminopeptidase CPE0872 SWALL:Q8XM18 (EMBL:AP003188) (591 aa) fasta scores: E(): 1.8e-101, 45.22 38d in 597 aa. (597 aa) |
| | CBO2264 | Putative oligopeptide transporter. (465 aa) |
| | fprA1 | Putative flavoprotein. (389 aa) |
| | CBO2842 | Putative flavoprotein. (399 aa) |
| | CBO2843 | acyl-CoA dehydrogenase. (635 aa) |
| | CBO2854 | Putative transposase (partial); Gene remnant. Similar to an internal region of Bacillus licheniformis putative transposase SWALL:Q8VL62 (EMBL:AF459921) (286 aa) fasta scores: E(): 5.2e-05, 28.9 id in 128 aa; was marked partial. (223 aa) |
| | CBO2855 | Hypothetical protein; No significant database matches. (83 aa) |
| | CBO2904 | Gene remnat. Similar to an internal part of phage envelope glycoprotein; was marked partial. (763 aa) |
| | thiC | Thiamine biosynthesis protein; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family. (437 aa) |
| | rub | Rubredoxin. (52 aa) |
| | rbr3A | Putative rubrerythrin. (181 aa) |
| | CBO3219 | Putative lipoprotein. (204 aa) |
| | perR | Putative oxidative stress regulatory protein; Belongs to the Fur family. (142 aa) |
| | CBO3302 | Putative iron-dependent hydrogenase. (498 aa) |
| | CBO3326 | Putative membrane protein. (181 aa) |
| | CBO3333 | Desulfoferrodoxin. (124 aa) |
| | CBO3334 | Conserved hypothetical protein. (64 aa) |
| | CBO3341 | Putative ATP-dependent DNA helicase. (709 aa) |
| | ftsH-2 | Cell division protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (658 aa) |
| | ecfT | ABC transporter, permease protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (267 aa) |
| | ecfA | ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (288 aa) |
| | ecfA-2 | ABC transporter, ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. (285 aa) |
| | CBO3550 | Iron-only hydrogenase. (449 aa) |
| | CBO3551 | Putative haloacid dehalogenase-like hydrolase. (214 aa) |
| | CBO3552 | Conserved hypothetical protein. (132 aa) |
| | CBO3578 | Conserved hypothetical protein. (501 aa) |
| | CBO3579 | Putative dehydratase/lyase activating enzyme. (279 aa) |
| | CBO3580 | Hypothetical protein; No significant database matches. (36 aa) |
| | CBO3581 | Conserved hypothetical protein. (83 aa) |
| | bioB | Biotin synthase. (348 aa) |
| | thiH | Thiazole biosynthesis protein. (458 aa) |
| | hydF | Putative ATP/GTP-binding protein. (399 aa) |
| | CBO3614 | Acyl-acyl carrier protein thioesterase. (249 aa) |
| | CBO3615 | Conserved hypothetical protein. (61 aa) |
| | CBO3617 | Conserved hypothetical protein. (461 aa) |
| | CBO3618 | Conserved hypothetical protein. (71 aa) |
