STRINGSTRING
fldZ fldZ acdB acdB CBO2843 CBO2843 acdA acdA dapB dapB CBO3521 CBO3521 pyrD pyrD etfA2 etfA2 CBO0647 CBO0647 CBO0675 CBO0675 bcd bcd dapB-2 dapB-2 CBO3108 CBO3108 CBO0919 CBO0919 hemN hemN cbiJ cbiJ CBO1020 CBO1020 CBO1022 CBO1022 CBO1528 CBO1528
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fldZCinnamate reductase; This enzyme was purified from C. sporogenes and its N-terminus sequenced (Dickert et al. 2000 Eur. J. Biochem. 267, 3874-3884. (665 aa)
acdBacyl-CoA dehydrogenase, short-chain specific. (377 aa)
CBO2843acyl-CoA dehydrogenase. (635 aa)
acdAPutative acyl-CoA dehydrogenase. (377 aa)
dapBDihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (265 aa)
CBO3521Putative dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (323 aa)
pyrDDihydroorotate dehydrogenase, catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate. (298 aa)
etfA2Electron transfer flavoprotein alpha-subunit; N-terminal extension relative to homologues. (398 aa)
CBO0647Conserved hypothetical protein. (396 aa)
CBO0675Putative dihydrouridine synthase (tRNA modification protein); Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. (319 aa)
bcdbutyryl-CoA dehydrogenase. (379 aa)
dapB-2Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (251 aa)
CBO3108Putative UDP-glucose/GDP-mannose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (438 aa)
CBO0919Putative precorrin oxidase. (220 aa)
hemNOxygen-independent coproporphyrinogen iii oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (383 aa)
cbiJPrecorrin-6x reductase. (255 aa)
CBO1020Putative exported protein. (126 aa)
CBO1022Putative flavodoxin. (162 aa)
CBO1528Conserved hypothetical protein. (180 aa)
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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