STRINGSTRING
hom hom sdhB sdhB lysC lysC CBO3010 CBO3010 relA relA lysC-2 lysC-2 tdcB tdcB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
homHomoserine dehydrogenase. (425 aa)
sdhBPutative L-serine dehydratase, beta chain; Belongs to the iron-sulfur dependent L-serine dehydratase family. (224 aa)
lysCPutative aspartokinase; Belongs to the aspartokinase family. (439 aa)
CBO3010Conserved hypothetical protein; Belongs to the UPF0735 family. (145 aa)
relAGTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (723 aa)
lysC-2Aspartokinase; Belongs to the aspartokinase family. (400 aa)
tdcBThreonine dehydratase catabolic. (407 aa)
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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