STRINGSTRING
CBO3409 CBO3409 nrdF nrdF ftnA ftnA CBO1436 CBO1436 rbr rbr cotJC cotJC CBO1136 CBO1136 CBO0996 CBO0996 CBO0644 CBO0644 CBO0512 CBO0512
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBO3409Two-component response regulator; PS00217 Sugar transport proteins signature 2. (160 aa)
nrdFRibonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. (342 aa)
ftnAFerritin; Iron-storage protein. (171 aa)
CBO1436Conserved hypothetical protein. (187 aa)
rbrPutative rubrerythrin. (195 aa)
cotJCPutative spore coat protein. (190 aa)
CBO1136Conserved hypothetical protein. (154 aa)
CBO0996Putative rubrerythrin. (143 aa)
CBO0644Conserved hypothetical protein. (162 aa)
CBO0512Conserved hypothetical protein. (63 aa)
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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