(7 nodes) Beta-grasp domain superfamily network (Clostridium botulinum A ATCC 3502)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CBO1491	Putative iron-sulfur cluster protein. (576 aa)
	xdhC1	Similar to Escherichia coli xanthine dehydrogenase iron-sulfur binding subunit xdhc or b2868 SWALL:XDHC_ECOLI (SWALL:Q46801) (159 aa) fasta scores: E(): 1.2e-15, 39.61 id in 154 aa, and to Clostridium tetani carbon monoxide dehydrogenase, small subunit ctc02474 SWALL:Q891A6 (EMBL:AE015944) (158 aa) fasta scores: E(): 4.4e-39, 62.5 id in 152 aa. (157 aa)
	xdhC2	Xanthine dehydrogenase iron-sulfur binding subunit. (157 aa)
	moaD	Putative molybdopterin converting factor,subunit 1. (75 aa)
	CBO2850	Putative dehydrogenase, [2Fe-2S] binding subunit. (162 aa)
	xdhAC	In Escherichia coli the molybdenum binding and iron-sulfur binding domains of xanthine dehydrogenase are carried on two separate genes, wheareas in this case they are present on a single gene. (856 aa)
	relA	GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (723 aa)

Your Current Organism:

Clostridium botulinum A ATCC 3502

NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBO2850	xdhAC	CBO2850	CBO2881	Putative dehydrogenase, [2Fe-2S] binding subunit.	In Escherichia coli the molybdenum binding and iron-sulfur binding domains of xanthine dehydrogenase are carried on two separate genes, wheareas in this case they are present on a single gene.	0.703
xdhAC	CBO2850	CBO2881	CBO2850	In Escherichia coli the molybdenum binding and iron-sulfur binding domains of xanthine dehydrogenase are carried on two separate genes, wheareas in this case they are present on a single gene.	Putative dehydrogenase, [2Fe-2S] binding subunit.	0.703
xdhAC	xdhC1	CBO2881	CBO0260	In Escherichia coli the molybdenum binding and iron-sulfur binding domains of xanthine dehydrogenase are carried on two separate genes, wheareas in this case they are present on a single gene.	Similar to Escherichia coli xanthine dehydrogenase iron-sulfur binding subunit xdhc or b2868 SWALL:XDHC_ECOLI (SWALL:Q46801) (159 aa) fasta scores: E(): 1.2e-15, 39.61 id in 154 aa, and to Clostridium tetani carbon monoxide dehydrogenase, small subunit ctc02474 SWALL:Q891A6 (EMBL:AE015944) (158 aa) fasta scores: E(): 4.4e-39, 62.5 id in 152 aa.	0.840
xdhAC	xdhC2	CBO2881	CBO1287	In Escherichia coli the molybdenum binding and iron-sulfur binding domains of xanthine dehydrogenase are carried on two separate genes, wheareas in this case they are present on a single gene.	Xanthine dehydrogenase iron-sulfur binding subunit.	0.835
xdhC1	xdhAC	CBO0260	CBO2881	Similar to Escherichia coli xanthine dehydrogenase iron-sulfur binding subunit xdhc or b2868 SWALL:XDHC_ECOLI (SWALL:Q46801) (159 aa) fasta scores: E(): 1.2e-15, 39.61 id in 154 aa, and to Clostridium tetani carbon monoxide dehydrogenase, small subunit ctc02474 SWALL:Q891A6 (EMBL:AE015944) (158 aa) fasta scores: E(): 4.4e-39, 62.5 id in 152 aa.	In Escherichia coli the molybdenum binding and iron-sulfur binding domains of xanthine dehydrogenase are carried on two separate genes, wheareas in this case they are present on a single gene.	0.840
xdhC1	xdhC2	CBO0260	CBO1287	Similar to Escherichia coli xanthine dehydrogenase iron-sulfur binding subunit xdhc or b2868 SWALL:XDHC_ECOLI (SWALL:Q46801) (159 aa) fasta scores: E(): 1.2e-15, 39.61 id in 154 aa, and to Clostridium tetani carbon monoxide dehydrogenase, small subunit ctc02474 SWALL:Q891A6 (EMBL:AE015944) (158 aa) fasta scores: E(): 4.4e-39, 62.5 id in 152 aa.	Xanthine dehydrogenase iron-sulfur binding subunit.	0.545
xdhC2	xdhAC	CBO1287	CBO2881	Xanthine dehydrogenase iron-sulfur binding subunit.	In Escherichia coli the molybdenum binding and iron-sulfur binding domains of xanthine dehydrogenase are carried on two separate genes, wheareas in this case they are present on a single gene.	0.835
xdhC2	xdhC1	CBO1287	CBO0260	Xanthine dehydrogenase iron-sulfur binding subunit.	Similar to Escherichia coli xanthine dehydrogenase iron-sulfur binding subunit xdhc or b2868 SWALL:XDHC_ECOLI (SWALL:Q46801) (159 aa) fasta scores: E(): 1.2e-15, 39.61 id in 154 aa, and to Clostridium tetani carbon monoxide dehydrogenase, small subunit ctc02474 SWALL:Q891A6 (EMBL:AE015944) (158 aa) fasta scores: E(): 4.4e-39, 62.5 id in 152 aa.	0.545