STRINGSTRING
grdE grdE prdA2 prdA2 prdD prdD prdE prdE prdA1 prdA1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
grdEPutative component of glycine reductase complex. (428 aa)
prdA2Putative subunit of proline reductase. (702 aa)
prdDPutative component of proline reductase. (258 aa)
prdEPutative component of proline reductase. (156 aa)
prdA1Putative proline reductase protein; Highly similar to CBO2480 (84.5 38d), CBO2483 (63.9 38d). (704 aa)
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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