STRINGSTRING
CBO2909 CBO2909 CBO0237 CBO0237 xdhB2 xdhB2 CBO0266 CBO0266 xdhB2-2 xdhB2-2 CBO2851 CBO2851 murB murB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CBO2909Putative modulator of ions transport. (441 aa)
CBO0237Similar to Streptomyces sp. JP95 putative fad-binding oxidoreductase Grho1 grho1 SWALL:Q8KSY2 (EMBL:AF509565) (467 aa) fasta scores: E(): 2.5e-25,30.81 38d in 464 aa, and to Bacillus cereus FAD-dependent oxidase bc0412 SWALL:Q81IH6 (EMBL:AE016999) (444 aa) fasta scores: E(): 5.9e-95, 52.16 38d in 439 aa. (443 aa)
xdhB2Similar to Escherichia coli xanthine dehydrogenase,FAD binding subunit XdhB or b2867 SWALL:XDHB_ECOLI (SWALL:Q46800) (292 aa) fasta scores: E(): 0.00013, 22.06 id in 281 aa, and to Bacillus cereus xanthine dehydrogenase fad-binding subunit bc3167 SWALL:Q81BJ0 (EMBL:AE017008) (279 aa) fasta scores: E(): 6.2e-54,52.89 38d in 276 aa. (279 aa)
CBO0266Putative FAD-dependent oxidoreductase; Similar to Clostridium perfringens probable reticuline oxidase cpe0406 SWALL:Q8XND2 (EMBL:AP003186) (448 aa) fasta scores: E(): 4.9e-57, 42.33 38d in 352 aa. (364 aa)
xdhB2-2Xanthine dehydrogenase, FAD-binding subunit. (294 aa)
CBO2851Putative dehydrogenase, FAD binding subunit. (276 aa)
murBUDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation. (306 aa)
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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