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rnfC rnfC prdC4 prdC4 prdC2 prdC2 prdC1 prdC1 hymB hymB prdC3 prdC3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rnfCElectron transport complex protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily. (439 aa)
prdC4Putative proline reductase (partial); Similar to the N-terminal region of Clostridium sticklandii proline reductase proprotein, two subunits PrdA SWALL:Q9Z4P6 (EMBL:AJ130879) (630 aa) fasta scores: E(): 1.9e-20, 53.47 38d in 144 aa. Possible gene remnant; was marked partial. (436 aa)
prdC2Putative electron transferring subunit of proline reductase; Similar to the N-terminal region of Clostridium sticklandii electron transfer protein PrdC SWALL:Q9L4Q5 (EMBL:AJ130879) (402 aa) fasta scores: E(): 9.7e-61,48.77 38d in 367 aa. (372 aa)
prdC1Putative electron transferring subunit of proline reductase; Similar to the N-terminal region of Clostridium sticklandii electron transfer protein PrdC SWALL:Q9L4Q5 (EMBL:AJ130879) (402 aa) fasta scores: E(): 6e-59, 47.13 id in 367 aa. (372 aa)
hymBPutative electron-transferring subunit of iron-only hydrogenase. (631 aa)
prdC3Putative proline reductase (partial); Similar to the N-terminal region of Clostridium sticklandii proline reductase proprotein, two subunits PrdA SWALL:Q9Z4P6 (EMBL:AJ130879) (630 aa) fasta scores: E(): 9.2e-15, 33.94 38d in 218 aa. Possible gene remnant; was marked partial. (434 aa)
Your Current Organism:
Clostridium botulinum A ATCC 3502
NCBI taxonomy Id: 413999
Other names: C. botulinum A str. ATCC 3502, Clostridium botulinum A str. ATCC 3502, Clostridium botulinum A strain ATCC 3502
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